Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P01
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.33 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    26   0.44 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = -3

Query: 237 INMILHAIFFLYFTVSSGLFMLILITVHISAYFFIYFLYF 118
           I+++ + +  +   +    +  IL TVH+     IY+ Y+
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYY 263



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 231 MILHAIFFLYFTVSSGLFMLILITVHISAYFFIYFLY 121
           ++L  I++ Y+         I+ T+H+     IY+ Y
Sbjct: 253 LLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFY 289


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 197 LCRRVYLC*Y*LQYISLHIFLSTFYIFLNNTLYSLRLH 84
           LC   +L    L YI L  FL+ FY  +     S  LH
Sbjct: 274 LCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLH 311


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 164 LQYISLHIFLSTFYIFLNNTLYSLRL 87
           LQ  +LH+F   + + L+   Y+L L
Sbjct: 166 LQAYTLHLFCVLYVVLLHFLTYNLSL 191


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 164 LQYISLHIFLSTFYIFLNNTLYSLRL 87
           LQ  +LH+F   + + L+   Y+L L
Sbjct: 166 LQAYTLHLFCVLYVVLLHFLTYNLSL 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,879
Number of Sequences: 336
Number of extensions: 2060
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)