Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_P01
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.46
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.46
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.3
Z82070-2|CAB04914.1| 199|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 9.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 9.9
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +1
Query: 487 PXPXXXFPXXXPXXXKXXXGXSPREXXFPPXFFXXPPGXSGXPXXPXXGXXXPXXXFFXP 666
P P FP P G P PP F PP P P P FF P
Sbjct: 298 PPPRGHFPPPPPHFM--GRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
Query: 667 QXXXXXXPPXPPXXG 711
P PP G
Sbjct: 356 PPPHFMRPSSPPTDG 370
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +1
Query: 487 PXPXXXFPXXXPXXXKXXXGXSPREXXFPPXFFXXPPGXSGXPXXPXXGXXXPXXXFFXP 666
P P FP P G P PP F PP P P P FF P
Sbjct: 298 PPPRGHFPPPPPHFM--GRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPP 355
Query: 667 QXXXXXXPPXPPXXG 711
P PP G
Sbjct: 356 PPPHFMRPSSPPTDG 370
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +1
Query: 574 PXFFXXPPGXSGX-PXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXX 750
P FF PP +G P P G P F PP PP G P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFA-----GGIPPPPPMMGGIPPPP------- 108
Query: 751 XXXPXXGXPXXPPXPXXXG 807
P G P PP P G
Sbjct: 109 ---PMFGAPPPPPPPSGLG 124
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXG-XXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFX 747
PP PP +G P P G P P PP PP G
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 748 XXXXPXXGXPXXPPXP 795
P G PP P
Sbjct: 318 GGSPPPAGTGSPPPPP 333
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXX 750
PP P SG P P P P PP PP G P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP-AGGSPPPPRAGSPPP 299
Query: 751 XXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
P P P GG G PP
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXG-XXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFX 747
PP PP +G P P G P P PP PP G
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 748 XXXXPXXGXPXXPPXP 795
P G PP P
Sbjct: 339 GGSPPPAGTGSPPPPP 354
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXX 750
PP P SG P P P P PP PP G P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP-AGGSPPPPRAGSPPP 320
Query: 751 XXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
P P P GG G PP
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXG-XXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFX 747
PP PP +G P P G P P PP PP G
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 748 XXXXPXXGXPXXPPXP 795
P G PP P
Sbjct: 324 GGSPPPAGTGSPPPPP 339
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/94 (24%), Positives = 23/94 (24%)
Frame = +1
Query: 571 PPXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXX 750
PP P SG P P P P PP PP G P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP-AGGSPPPPRAGSPPP 305
Query: 751 XXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
P P P GG G PP
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z82070-2|CAB04914.1| 199|Caenorhabditis elegans Hypothetical
protein W04E12.2 protein.
Length = 199
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 209 FCTLLCRRVYLC*Y*LQYISLHIFLSTFYIFLNN-TLYSLRL 87
F TLLC Y+C + +S F T ++ L N T+ S+ L
Sbjct: 89 FLTLLCSNQYICDHHSWIVSFSTFFFTAHVHLTNATISSIEL 130
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -1
Query: 623 GXXGXPXXPGGXXKNXGGKXXSRGEXPXXXXXXXGXXXGXXXXGXGXXXG 474
G G P PGG GG+ E P G G G G G
Sbjct: 167 GRHGGPGGPGGRRMGPGGRGGDSREGPMMGGMGRGGFGGQGMGGMGAGLG 216
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = +1
Query: 574 PXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXXX 753
P PP G P P G P PP PP G P
Sbjct: 707 PPITGGPPPPPGLP--PITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPP 761
Query: 754 XXPXXGXPXXPPXPXXXGGXKXXXGPP 834
P G P PP P GG K PP
Sbjct: 762 PPPPGGCP-PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 688 PPXPPXXGXXXXXPXXXXFXXXXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
PP PP P P G P PP P GG G P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = +1
Query: 574 PXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXXX 753
P PP G P P G P PP PP G P
Sbjct: 707 PPITGGPPPPPGLP--PITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPP 761
Query: 754 XXPXXGXPXXPPXPXXXGGXKXXXGPP 834
P G P PP P GG K PP
Sbjct: 762 PPPPGGCP-PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 688 PPXPPXXGXXXXXPXXXXFXXXXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
PP PP P P G P PP P GG G P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = +1
Query: 574 PXFFXXPPGXSGXPXXPXXGXXXPXXXFFXPQXXXXXXPPXPPXXGXXXXXPXXXXFXXX 753
P PP G P P G P PP PP G P
Sbjct: 290 PPITGGPPPPPGLP--PITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---PISGGPPPP 344
Query: 754 XXPXXGXPXXPPXPXXXGGXKXXXGPP 834
P G P PP P GG K PP
Sbjct: 345 PPPPGGCP-PPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 688 PPXPPXXGXXXXXPXXXXFXXXXXPXXGXPXXPPXPXXXGGXKXXXGPPXXXXPP 852
PP PP P P G P PP P GG G P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPP 347
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/96 (27%), Positives = 26/96 (27%), Gaps = 5/96 (5%)
Frame = -1
Query: 863 GXXXGGXXXXGGPXXFFXPPXXXGXGGXX---GXPXXGXXXXXKXXXXGXXXXXPXXGGX 693
G GG GGP F P G G P G P GG
Sbjct: 121 GSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGM 180
Query: 692 GGXXXXXXWGXKXXXXGXXXPXXGXXGX--PXXPGG 591
GG G G P G G P PGG
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/96 (27%), Positives = 26/96 (27%), Gaps = 5/96 (5%)
Frame = -1
Query: 863 GXXXGGXXXXGGPXXFFXPPXXXGXGGXX---GXPXXGXXXXXKXXXXGXXXXXPXXGGX 693
G GG GGP F P G G P G P GG
Sbjct: 401 GSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGM 460
Query: 692 GGXXXXXXWGXKXXXXGXXXPXXGXXGX--PXXPGG 591
GG G G P G G P PGG
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGG 496
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,152,616
Number of Sequences: 27780
Number of extensions: 234390
Number of successful extensions: 787
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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