Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O23
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0744 + 21121757-21122202,21122316-21122737,21122992-211231...    30   2.9  
07_03_0184 - 14825142-14825551,14826163-14826280                       28   8.8  
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919...    28   8.8  

>07_03_0744 +
           21121757-21122202,21122316-21122737,21122992-21123117,
           21123198-21123319,21123413-21123623,21123955-21124192,
           21124284-21124431,21124547-21124879
          Length = 681

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 305 FYGGKAELQLNPPL-RAFGTGIGRVKQRIANKNSIS 409
           F+GG+A LQL+PPL  A  T +G  +     K S++
Sbjct: 261 FFGGRAMLQLSPPLPPAVDTPVGTHEPGAGKKKSVA 296


>07_03_0184 - 14825142-14825551,14826163-14826280
          Length = 175

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 187 MVGSRIFPRQCFWKSF-SSSRPLKPYLGPAN*PPADIRRSLLRWK 318
           +V   +FP  C WK+   SS P K    PA   P+   +    WK
Sbjct: 131 LVKKTMFPSNCHWKTLVKSSIPAKKLEQPAQKKPSSTPKPKKVWK 175


>03_06_0051 +
           31290431-31290610,31290727-31290849,31291771-31291928,
           31292395-31292497,31293077-31293172,31293367-31293432,
           31293500-31293619,31293905-31293991
          Length = 310

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = -1

Query: 454 HGNPINIFPSLEIRF*NRIFISYSLFNSANAGPKGPKRRVELKFGLSTVEENAE 293
           HG P NI   L      R    Y  F+ A  GP+  +R       L+ VEE  E
Sbjct: 186 HGEPFNI---LRYEIGQRYASHYDAFDPAQYGPQKSQRVASFLLYLTDVEEGGE 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,272,568
Number of Sequences: 37544
Number of extensions: 413633
Number of successful extensions: 908
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)