Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O21
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   202   4e-52
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical ...    29   6.0  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  202 bits (492), Expect = 4e-52
 Identities = 105/207 (50%), Positives = 131/207 (63%), Gaps = 2/207 (0%)
 Frame = +2

Query: 119 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 292
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 293 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 472
           TR PR+V+V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 473 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVIS 652
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 653 DTGNVIGKHRKNHIPRVGDFNEFNYYM 733
            TG VIG+ RKNHIPRVGDFNE  YYM
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYM 214



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +1

Query: 742 TPGHPVFATRYGKIAVNXCFGR 807
           T GHPVF T+YG+I +N C+GR
Sbjct: 217 TLGHPVFETKYGRIGINICYGR 238


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 681 RCFPITFPVSLMTTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 535
           +C P+TF ++   T +       F+++  IE+T I IA L+  +   V++
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 377 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 511
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 377 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 511
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -1

Query: 555 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 409
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical
           protein Y71G12A.2 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = -1

Query: 723 LNSLKSPTLGMWFLRCFPITFPVSLMTTAVFQSMSECFSSLSNIEDTITIAYLMASSRRK 544
           LN   S TLG W L   PI+    ++++A+  +   C + +  + D + +  L  ++R +
Sbjct: 454 LNPEDSETLGKWLLSIKPISLESKVLSSAIKSNEQMC-TEMEKVHD-VCVGSLNHANRHR 511

Query: 543 VV 538
            V
Sbjct: 512 FV 513


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,512,561
Number of Sequences: 27780
Number of extensions: 407497
Number of successful extensions: 1193
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)