Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O18
         (946 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0690 + 5033943-5034740                                           29   5.4  
06_03_0335 + 19662933-19663334,19663358-19664023                       28   9.4  

>06_01_0690 + 5033943-5034740
          Length = 265

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -1

Query: 769 GGTGIPVNGQGWEKGGARGXFQGETPGXFIVXSG 668
           GG G   NG GW  G   G  Q   PG +    G
Sbjct: 38  GGGGGSGNGSGWGSGSGSGYGQASGPGGYASGGG 71


>06_03_0335 + 19662933-19663334,19663358-19664023
          Length = 355

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 793 PTLSRRXKGGTGIPVNGQGWEKGGARGXFQGET 695
           PT + R +G    P+ G G  +GG  G  +G T
Sbjct: 84  PTFTYRARGAAASPLVGGGGRRGGGSGKGKGAT 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,028,645
Number of Sequences: 37544
Number of extensions: 218967
Number of successful extensions: 397
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)