Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O16
(925 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 101 1e-21
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 87 2e-17
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 80 2e-15
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 69 7e-12
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 61 1e-09
10_08_0050 + 14469879-14470072,14470620-14471094 32 0.74
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 31 0.98
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154... 30 2.3
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421... 30 3.0
05_07_0219 - 28474661-28475146,28475979-28476644 30 3.0
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 29 5.2
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 29 5.2
02_01_0675 - 5028910-5030379 29 5.2
03_03_0047 - 14046750-14046788,14046896-14047045,14047143-140472... 29 6.9
03_03_0019 + 13786412-13786578,13786692-13786744,13787299-137874... 29 6.9
08_01_0945 + 9376997-9377818,9378065-9378373,9379510-9379800,938... 28 9.1
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 28 9.1
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 101 bits (241), Expect = 1e-21
Identities = 71/196 (36%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Frame = +3
Query: 222 SSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVA 401
++ A I V VIG G MGSGIAQ++A AG V L+D AL++A SI ++L R+
Sbjct: 2 ATQATAREIAVVGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLV 61
Query: 402 KKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVX 581
K Q + S+ +I + E + ADLV+EAIVE+ +K KLF +LD +
Sbjct: 62 AK-----GQLSQASCEHSIEQIKCVSSVQEL-RDADLVIEAIVESEDIKKKLFVELDKIT 115
Query: 582 PSHTIFASNTSSLSINEIASVVKKERQIWRSSFLQSGPXDALLXVVK-AVXHRKLHTKL* 758
I ASNTSS+SI +AS + Q+ F P L+ +++ A ++ TK+
Sbjct: 116 KPSAILASNTSSISITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVK 175
Query: 759 WXGXKLVGKTCITCKD 806
+L GKT I +D
Sbjct: 176 SFSERL-GKTVICSQD 190
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 87.0 bits (206), Expect = 2e-17
Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Frame = +3
Query: 246 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKK--MYKD 419
I+ V VIGGGLMGSGIA + +V L +V+ L + +K I NL + K+ + KD
Sbjct: 309 IRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKD 368
Query: 420 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVXPSHTIF 599
+N ++ + A D ++ K D+V+EA++E I +K +F L+ V P H I
Sbjct: 369 K-------MNKAMSLLKGALDYSDF-KDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCIL 420
Query: 600 ASNTSSLSINEIASVVKKERQIWRSSFLQSGPXDALLXVVK 722
A+NTS++ +N + + +I + F LL +V+
Sbjct: 421 ATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVR 461
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 80.2 bits (189), Expect = 2e-15
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Frame = +3
Query: 234 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNL-SRVAK-K 407
M + V ++GGGLMGSGIA + V L +V+ L I NL SRV K K
Sbjct: 310 MPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGK 369
Query: 408 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVXPS 587
M ++ ++ V L E K DLV+EA++EN+ +K ++F L+ PS
Sbjct: 370 MTEERYEKAMSLVTGVLDY--------ERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPS 421
Query: 588 HTIFASNTSSLSINEIASVVKKERQIWRSSFLQSGPXDALLXVVK 722
H + A+NTS++ +N I + + +I + F LL +V+
Sbjct: 422 HCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVR 466
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 68.5 bits (160), Expect = 7e-12
Identities = 46/172 (26%), Positives = 81/172 (47%)
Frame = +3
Query: 207 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTN 386
+ N S I V ++GGGLMGSGIA V L +V+ L + N
Sbjct: 298 IPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKAN 357
Query: 387 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQ 566
L + K+ Q ++ + L ++ D E + AD+V+EA++E++ +K K+F
Sbjct: 358 LQSLVKR-----GQMTKEDYENKLSLLSGVLDY-EQFREADVVIEAVIEDLSLKQKIFAD 411
Query: 567 LDGVXPSHTIFASNTSSLSINEIASVVKKERQIWRSSFLQSGPXDALLXVVK 722
L+ S+ I A+NTS++ ++ I + +I + F LL +++
Sbjct: 412 LEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIR 463
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 60.9 bits (141), Expect = 1e-09
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Frame = +3
Query: 234 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNL-SRVAK-K 407
M + V ++GGGLMGSGIA + V L +V++ L I NL SRV K
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 408 MYKDNPQEGEKFVNDSLG--RINTATDAAEASKSADLVVE---------AIVENIGVKHK 554
M K+ ++ + + R E S +++ + A+VEN+ VK +
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQ 425
Query: 555 LFKQLDGVXPSHTIFASNTSSLSINEIASVVKKERQIWRSSFLQSGPXDALLXVVKA 725
+F L+ PSH + A+NTS++ ++ I + +I + F LL +V++
Sbjct: 426 VFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 482
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 372 SIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKH 551
S+ T +S KK D P GE+ + + G +T++D + + S++++ EN+G+
Sbjct: 73 SVATAVSLSLKKSNPD-PPTGEEGADLACGFTSTSSDRSNSGNSSEMLRFCRRENLGIGS 131
Query: 552 KL-FKQLDGVXPSHT 593
+L +L+ P+H+
Sbjct: 132 ELGGGELENAGPAHS 146
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.5 bits (68), Expect = 0.98
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 282 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGT 383
GS +AQ+S +G VTL D DA+ K + GT
Sbjct: 604 GSKLAQISEMSGATVTLADERPDAIEKVVRISGT 637
>02_05_0863 +
32313890-32314132,32314227-32314517,32315157-32315493,
32315944-32316278,32316763-32317010,32317296-32317881,
32317970-32318083,32318165-32318287,32318325-32318531
Length = 827
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 372 SIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAA---EASKSADLVVEAIVEN 536
S G N + MY D+ E + FV+ + ++N ATD + AS+ LV+ ++N
Sbjct: 614 SFGRNEDDLDLLMYSDSELEEQTFVDQEVEKVNLATDKSWEDYASREFTLVLSKTLKN 671
>07_01_0567 -
4214196-4214351,4214539-4214845,4215005-4215069,
4215406-4215471,4215594-4215639,4215671-4216200
Length = 389
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 255 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEG 434
V +GGG + + V +NVTL+D S L KA++ + N + + +D P
Sbjct: 107 VVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLPYPT 166
Query: 435 EKF 443
+ F
Sbjct: 167 DTF 169
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 307 PKQDRMLP*LTSAMMLWLKPRRALAQTSAGSQRRCTKIIPKKER 438
P P TSA +LW +PR + G QRR ++ K+ R
Sbjct: 109 PTSPTPTPPPTSATLLWPRPRPTKEEEGEGLQRRTDAVLVKRLR 152
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 292 MPEPIRPPPITVTFLIALCIAEELEKFLTITL 197
+P+PI P P TV L+ AE E + TI+L
Sbjct: 64 LPDPIHPVPCTVADLVLDVDAESGEAYATISL 95
>06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 420 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVXPSHTIF 599
+P E EK +N SL N S D + ++G+ L + DGV P H ++
Sbjct: 1076 HPDEAEKVLN-SLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVW 1134
Query: 600 ASNTSSLSINE 632
S + S+ E
Sbjct: 1135 TSFIRAASLCE 1145
>02_01_0675 - 5028910-5030379
Length = 489
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 252 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVS 344
++ V+GGG G +AQ A+AG +V +D S
Sbjct: 69 DLAVVGGGPAGLAVAQRVAEAGLSVCAIDPS 99
>03_03_0047 -
14046750-14046788,14046896-14047045,14047143-14047277,
14047615-14047673,14047755-14047871,14048035-14048073,
14048245-14048425,14049381-14049464,14049565-14049633,
14050175-14050315,14050435-14050527,14050767-14050895,
14051187-14051501
Length = 516
Score = 28.7 bits (61), Expect = 6.9
Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = +3
Query: 246 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAK--KMYKD 419
+KN+ + L G + A+ ++++VD+ L+K + + + V + K K
Sbjct: 120 LKNLKTVLESLRGRVTGKTKAELEDSISMVDILAVQLSKREAELLQQKAEVTELAKSLKL 179
Query: 420 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVXPSHTIF 599
++ +K V++ R + T+ A S V +A+ E+ + KQ
Sbjct: 180 ASEDAKKIVDEE--RASAHTEIESARSSVQRVQQALQEHEKMSRTTGKQDMEELKKEVRE 237
Query: 600 ASNTSSLSINEIASVVKKERQIWRSSFLQ 686
A L A ++ E +I R +F++
Sbjct: 238 ARRIKMLHYPSKAMDLENEIKILRKTFVE 266
>03_03_0019 +
13786412-13786578,13786692-13786744,13787299-13787417,
13787767-13788024,13799876-13800010,13800253-13800318,
13800673-13800785,13800895-13800967
Length = 327
Score = 28.7 bits (61), Expect = 6.9
Identities = 34/143 (23%), Positives = 67/143 (46%)
Frame = +3
Query: 207 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTN 386
+ + S++ + A+ VT+ G +GS V++Q+G + + K K +
Sbjct: 70 ISDLSAALDSEGALPLVTL--RGQVGSETRIVASQSGCQAVIAEQQVRQHCKTK-----H 122
Query: 387 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQ 566
+++ AK K N ++GE+F+ + R ATD E LVV+ +G +H+ K+
Sbjct: 123 VTKSAKT--KINEKDGEEFL---VLRRTKATDGDEY-----LVVKRTRVKVGTEHRPTKR 172
Query: 567 LDGVXPSHTIFASNTSSLSINEI 635
+ + + +N S + NE+
Sbjct: 173 VRDIDVEQWVHGTNVVSSTKNEV 195
>08_01_0945 +
9376997-9377818,9378065-9378373,9379510-9379800,
9380060-9380173,9380280-9380981
Length = 745
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 562 LNNLCFTPIFSTIASTTRSADLEASAASVAVLILPSESFTNFSPSWGLSLYI 407
L LC +F + ST + A+L + LILP SFT F L++++
Sbjct: 500 LFRLCLPAVFKSKISTWKKANLVMLFFLLRKLILPFYSFTLFCVILPLTMFV 551
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 568 SCLNNLCFTPIFSTIASTTRSADLEASAASVAVLILPSESFTNFSPSWG 422
SCL + S AS + + D + + VLI S SF N S +G
Sbjct: 1151 SCLLAASLFKLHSKSASNSTATDFDIELRDLGVLICGSSSFKNVSCGYG 1199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,515,502
Number of Sequences: 37544
Number of extensions: 380549
Number of successful extensions: 947
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -