Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O14
(1046 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.45
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.78
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.78
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.78
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.78
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.8
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 5.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 7.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 7.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 7.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 7.3
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.45
Identities = 26/99 (26%), Positives = 30/99 (30%), Gaps = 2/99 (2%)
Frame = +1
Query: 547 APPPQXXGPXXXXPPXRXXXRXXSXXXAP-AXACRSAXXXPXPPXGXXXXPXXXSGXXXP 723
AP PQ P PP P A ++A P PP + P
Sbjct: 55 APYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPP 114
Query: 724 SPXXXGXXPPXXP-QXQGEXXPXRXXXPAXPPRXPXPVP 837
+P P P Q Q P P PP P P P
Sbjct: 115 APYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.78
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = -1
Query: 836 GTGXGXRGGXAGXXXRXGXXSP*XWGXXGGXXPXXXGDGXXXPXXXXGXXXXPXGGXGXX 657
G G G GG G S WG G G G GG G
Sbjct: 158 GGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGS 217
Query: 656 XADLQALAGAXXXXXXRXXXRXGGXXXK-GPXXWGGG 549
Q G+ + + GG + GP WGGG
Sbjct: 218 QGGSQG--GSQGGWGNQGGQQGGGRGGQQGPGGWGGG 252
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.78
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 670 PPXGXXXXPXXXSGXXXPSPXXXGXXPPXXPQXQGEXXPXRXXXPAXPPRXPXPVPXLRG 849
PP G P G SP G P P G P R P PP P P G
Sbjct: 232 PPAGSPPPPPPPKG----SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = +1
Query: 652 AXXXPXPPXGXXXXPXXXSGXXXPSPXXXGXXPP----XXPQXQGEXXPXRXXXPAXPPR 819
A P PP P SG P P PP P G P PPR
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 820 --XPXPVPXLRGXXGXG 864
P P P RG G
Sbjct: 294 AGSPPPPPPPRGSPPTG 310
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +1
Query: 664 PXPPXGXXXXPXXXSGXXXPSPXXXGXXPP---XXPQXQGEXXPXRXXXPAXPPRXPXPV 834
P PP G P +G P P G P PQ G P P PPR
Sbjct: 281 PPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 339
Query: 835 P 837
P
Sbjct: 340 P 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.78
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 670 PPXGXXXXPXXXSGXXXPSPXXXGXXPPXXPQXQGEXXPXRXXXPAXPPRXPXPVPXLRG 849
PP G P G SP G P P G P R P PP P P G
Sbjct: 253 PPAGSPPPPPPPKG----SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = +1
Query: 652 AXXXPXPPXGXXXXPXXXSGXXXPSPXXXGXXPP----XXPQXQGEXXPXRXXXPAXPPR 819
A P PP P SG P P PP P G P PPR
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 820 --XPXPVPXLRGXXGXG 864
P P P RG G
Sbjct: 315 AGSPPPPPPPRGSPPTG 331
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +1
Query: 664 PXPPXGXXXXPXXXSGXXXPSPXXXGXXPP---XXPQXQGEXXPXRXXXPAXPPRXPXPV 834
P PP G P +G P P G P PQ G P P PPR
Sbjct: 302 PPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 360
Query: 835 P 837
P
Sbjct: 361 P 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.78
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 670 PPXGXXXXPXXXSGXXXPSPXXXGXXPPXXPQXQGEXXPXRXXXPAXPPRXPXPVPXLRG 849
PP G P G SP G P P G P R P PP P P G
Sbjct: 238 PPAGSPPPPPPPKG----SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = +1
Query: 652 AXXXPXPPXGXXXXPXXXSGXXXPSPXXXGXXPP----XXPQXQGEXXPXRXXXPAXPPR 819
A P PP P SG P P PP P G P PPR
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 820 --XPXPVPXLRGXXGXG 864
P P P RG G
Sbjct: 300 AGSPPPPPPPRGSPPTG 316
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +1
Query: 664 PXPPXGXXXXPXXXSGXXXPSPXXXGXXPP---XXPQXQGEXXPXRXXXPAXPPRXPXPV 834
P PP G P +G P P G P PQ G P P PPR
Sbjct: 287 PPPPAG-GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQA 345
Query: 835 P 837
P
Sbjct: 346 P 346
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +1
Query: 751 PXXPQXQGEXXPXRXXXPAXPPRXPXPVPXLRGXXGXGGXXXXLVPXXXXXGGXVFXFXP 930
P P + P R A PP P P G G GG L+P GG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG--GGGGMYPPLIPTRPGPGGPPPNMAP 828
Query: 931 PR 936
PR
Sbjct: 829 PR 830
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +1
Query: 751 PXXPQXQGEXXPXRXXXPAXPPRXPXPVPXLRGXXGXGGXXXXLVPXXXXXGGXVFXFXP 930
P P + P R A PP P P G G GG L+P GG P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPG--GGGGMYPPLIPTRPGPGGPPPNMAP 828
Query: 931 PR 936
PR
Sbjct: 829 PR 830
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 664 PXPPXGXXXXPXXXSGXXXPSPXXXGXXPPXXPQXQGEXXPXRXXXPAXPPRXP 825
P P G P G P P G PP P G P PP P
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +1
Query: 664 PXPPXGXXXXPXXXSGXXXPSPXXXGXXPPXXPQXQGEXXPXRXXXPAXPPRXPXP 831
P P G P +G P P G PP P P P+ P P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 5.5
Identities = 25/107 (23%), Positives = 30/107 (28%), Gaps = 1/107 (0%)
Frame = +1
Query: 550 PPPQXXGPXXXXPPXRXXXRXXSXXXAPAXACRSAXXXPXPPXGXXXXPXXXSGXXXPSP 729
PP Q P PP + + P A A P P +G P
Sbjct: 137 PPVQPCEPITP-PPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPG 195
Query: 730 XXXGXXPPXXPQXQGEXXPXRXXXPAXP-PRXPXPVPXLRGXXGXGG 867
P P G+ P P P P+ P P G G G
Sbjct: 196 PPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAGPDGQPG 242
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -1
Query: 836 GTGXGXRGGXAGXXXRXGXXSP*XWGXXGGXXPXXXGDGXXXPXXXXGXXXXPXGGXG 663
G G G GG G G G GG GDG P G P GG G
Sbjct: 187 GFGGGGMGGYGGGMGGGGYGG----GGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYG 240
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -1
Query: 962 GRAPXPMXNRGGXXXKTXPPXXXXXGTRXXXXPPXPXXPRXMGTGXGXRGGXAG 801
G P N G PP G+ PP P P G R G G
Sbjct: 502 GPPPRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGG 555
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +1
Query: 547 APPPQXXGPXXXXPPXRXXXRXXSXXXAPAXACRSAXXXPXPPXGXXXXPXXXSGXXXPS 726
A PP GP PP P P PP P G P
Sbjct: 705 ALPPITGGPPP--PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 727 PXXXGXXPPXXPQXQG 774
P G PP P G
Sbjct: 763 PPPGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +1
Query: 547 APPPQXXGPXXXXPPXRXXXRXXSXXXAPAXACRSAXXXPXPPXGXXXXPXXXSGXXXPS 726
A PP GP PP P P PP P G P
Sbjct: 705 ALPPITGGPPP--PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 727 PXXXGXXPPXXPQXQG 774
P G PP P G
Sbjct: 763 PPPGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +1
Query: 547 APPPQXXGPXXXXPPXRXXXRXXSXXXAPAXACRSAXXXPXPPXGXXXXPXXXSGXXXPS 726
A PP GP PP P P PP P G P
Sbjct: 288 ALPPITGGPPP--PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 727 PXXXGXXPPXXPQXQG 774
P G PP P G
Sbjct: 346 PPPGGCPPPPPPPPPG 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,019,439
Number of Sequences: 27780
Number of extensions: 123287
Number of successful extensions: 199
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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