Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O12
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.4
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 645 PPPPPXXGGGXFFPXXKNPPXFFXG 571
PPPPP GGG P PP + G
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGG 65
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFFXG 571
PPP PPPPP GG P PP F G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGGGXXXXXXXXXXXXXFXGXKNXFXXKKPPXFXXXGGXKK 507
PPPP PPPPP GG G PP GG K
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFK- 781
Query: 506 XGGEXFPPP 480
GG PPP
Sbjct: 782 -GGPPPPPP 789
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXG 624
PPPP F PPPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGG 621
PPPP PPPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFF 577
PPP PPPPP GG P PP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFFXG 571
PPP PPPPP GG P PP F G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGGGXXXXXXXXXXXXXFXGXKNXFXXKKPPXFXXXGGXKK 507
PPPP PPPPP GG G PP GG K
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFK- 781
Query: 506 XGGEXFPPP 480
GG PPP
Sbjct: 782 -GGPPPPPP 789
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXG 624
PPPP F PPPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGG 621
PPPP PPPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFF 577
PPP PPPPP GG P PP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFFXG 571
PPP PPPPP GG P PP F G
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGGGXXXXXXXXXXXXXFXGXKNXFXXKKPPXFXXXGGXKK 507
PPPP PPPPP GG G PP GG K
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG-----GCPPPPPPPPPGGFK- 364
Query: 506 XGGEXFPPP 480
GG PPP
Sbjct: 365 -GGPPPPPP 372
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXG 624
PPPP F PPPPP G
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPG 374
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGG 621
PPPP PPPPP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG 317
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 684 PPPXXXFFFXXXXPPPPPXXGGGXFFPXXKNPPXFF 577
PPP PPPPP GG P PP F
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGG 621
PPPP PPPPP GG
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGG 598
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 394 PRKXXGGPPPLXKRXXPPFXGPGXFXXXXGGGXFSPPXFXXPPFXXKXGG 543
P + GPPP + PP GPG G + + PP GG
Sbjct: 593 PPQQQQGPPPNWRHQGPPMSGPGQGYGPPGRMGGNQGGWQRPPPQGSYGG 642
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGGG 618
PPPP PPPPP GG
Sbjct: 796 PPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 686 PPPPXXXFFFXXXXPPPPPXGGG 618
PPPP PPPPP GG
Sbjct: 796 PPPPLPPISSGAPPPPPPPPPGG 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,753
Number of Sequences: 27780
Number of extensions: 286001
Number of successful extensions: 1040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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