Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O10
         (954 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0508 + 34417540-34417649,34418239-34418338,34418445-344184...   215   6e-56
03_06_0489 - 34284301-34284336,34285104-34285227,34285307-342853...    56   3e-08
04_04_0886 - 29089083-29089211,29089702-29089890,29089968-290901...    31   1.8  
06_03_1488 + 30484904-30485134,30485239-30487159,30487255-304876...    30   2.4  
03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948...    30   2.4  
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196...    29   5.5  

>03_06_0508 +
           34417540-34417649,34418239-34418338,34418445-34418478,
           34418559-34418635,34418929-34419005,34419060-34419224,
           34419306-34419420,34419546-34419650
          Length = 260

 Score =  215 bits (524), Expect = 6e-56
 Identities = 104/197 (52%), Positives = 143/197 (72%), Gaps = 17/197 (8%)
 Frame = +2

Query: 212 RDKYSILLPTYNERENLPIIIWLIIKYLDESGVDYEVIIIDDGSPDGTSEVARQLQKLYG 391
           R +YSI++PTYNER N+ +I++LI K+L +  V++E+I++DDGSPDGT ++ +QLQ++YG
Sbjct: 9   RREYSIIVPTYNERLNVALIVYLIFKHLPD--VNFEIIVVDDGSPDGTQDIVKQLQQIYG 66

Query: 392 SSKIVLRPREMKLGLGTAYIHGIQQASGNFIIIMDADLSHHPKFIPEFI----------- 538
            ++++LR R  KLGLGTAY+HG++ ASG+F++IMDADLSHH   I E +           
Sbjct: 67  ENRVLLRARPRKLGLGTAYLHGLKHASGDFVVIMDADLSHHMLEISETLEQSPLQLDSYQ 126

Query: 539 ------KLQLKYDYDIVSGTRYKGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGS 700
                 K Q +   D+V+GTRY  +GGV+GW+  RKL SRGAN L Q +L+PG SDLTGS
Sbjct: 127 GYYTDKKKQKETGADVVTGTRYVQNGGVHGWNLMRKLTSRGANVLAQTLLQPGASDLTGS 186

Query: 701 FRLYKKEALEKLILSCV 751
           FRLYK+  LE LI SCV
Sbjct: 187 FRLYKRNVLEDLISSCV 203


>03_06_0489 -
           34284301-34284336,34285104-34285227,34285307-34285371,
           34285472-34285555,34285661-34285789,34285887-34285976,
           34286116-34286250,34286939-34286984,34287119-34287225,
           34287355-34287412,34287524-34287765
          Length = 371

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
 Frame = +2

Query: 215 DKY-SILLPTYNERENLPIIIWLIIKYLDE-SGVD----YEVIIIDDGSPDGTSEVARQL 376
           +KY S+++P YNE   LP  +   + YL + S V+    YEV+I+DDGS D TS+VA + 
Sbjct: 111 EKYISLIIPAYNEEHRLPEALTETLNYLKQRSAVEKSFTYEVLIVDDGSTDHTSKVAFEF 170

Query: 377 QKLYGSSKIVLRPREMKLGLGTAYIHGIQQASGNFIIIMDAD 502
            + +    + +       G G A   G+  + G  ++++DAD
Sbjct: 171 VRKHKIDNVRVLLLGRNHGKGEAVRKGMLHSRGELLLMLDAD 212


>04_04_0886 -
           29089083-29089211,29089702-29089890,29089968-29090121,
           29090389-29090489,29090970-29091020,29092606-29092761
          Length = 259

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 170 IVVDSMEVDSGLIKRDKYSILLPTYNERENLPIIIWLIIKYL 295
           + VDS   D+G  K+D  S    T NE  N P  I +++KY+
Sbjct: 181 VPVDSSSADNGESKKDSNSRASTTSNESLNHPSNIHIVMKYV 222


>06_03_1488 +
           30484904-30485134,30485239-30487159,30487255-30487691,
           30487777-30487983
          Length = 931

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 466 LLYPMNVGSSETKLHLARSKHYFRGAIELLQLT 368
           +L P  V  + T LHL++S  YFR  +E +++T
Sbjct: 637 ILSPFIVAQASTVLHLSKSNLYFRPDLERIRIT 669


>03_02_0565 -
           9484045-9484335,9484621-9484686,9484790-9484867,
           9485005-9485157,9485271-9485356,9485445-9485551,
           9485685-9485752,9485890-9485912,9487627-9487732,
           9487772-9487899,9487989-9488065,9488126-9488131,
           9488206-9488264
          Length = 415

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +2

Query: 482 IIIMDADLSHHPKFIPEFIKLQLKYDYDIVSGTRYKGSGGVYG 610
           +I  D DL HH  F P    LQ    +   S   Y G   +YG
Sbjct: 156 MIAADYDLFHHMSFSPSLQNLQSPTFFTTRSSESYLGESSIYG 198


>03_06_0109 -
           31717691-31718311,31719110-31719223,31719316-31719606,
           31719698-31720006,31720098-31720865
          Length = 700

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
 Frame = +2

Query: 227 ILLPTYNERENLPIIIWLIIKYLDESGVDYEVIIIDDGSPDGTSEVARQ--LQKLYGSSK 400
           + +P  NE+E     I  +   LD    ++ V ++DD     T  + R+  L+     ++
Sbjct: 247 VQIPMCNEKEVYQQSIAAVCN-LDWPRSNFLVQVLDDSDDPTTQTLIREEVLKWQQNGAR 305

Query: 401 IVLRPREMKLGLGTAYIHGIQQASG----NFIIIMDADLSHHPKFI 526
           IV R R ++ G     +      S      F+ I DAD   +P F+
Sbjct: 306 IVYRHRVLRDGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPNPDFL 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,771,578
Number of Sequences: 37544
Number of extensions: 338521
Number of successful extensions: 745
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)