Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O07
         (1011 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    33   0.48 
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453...    29   4.5  

>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 16/57 (28%), Positives = 20/57 (35%)
 Frame = +3

Query: 585 PPXNXTPXPPXXGSRXPPXSPXDXTXXPXPXXXXRXLSHSXPHKLPXPXETXXGLAN 755
           PP    P PP      PP  P        P      L++  P  +P P  T   +AN
Sbjct: 276 PPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPPPMTGGAMAN 332


>02_04_0005 -
           18843061-18843201,18843309-18843440,18844457-18845315,
           18845884-18845973,18846748-18846869,18846950-18847049,
           18847151-18847205,18847275-18847365,18847453-18847572,
           18847681-18847780,18847890-18848018,18848099-18848201,
           18848670-18848743,18848848-18848933,18849297-18849358,
           18849454-18849541,18849937-18850029
          Length = 814

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/50 (30%), Positives = 16/50 (32%)
 Frame = +3

Query: 525 PXXXPHTIXXXYXXRCXXXXPPXNXTPXPPXXGSRXPPXSPXDXTXXPXP 674
           P   PHT        C    PP + TP         PP SP      P P
Sbjct: 654 PPAKPHTTAIVKGSTCYPPPPPPSSTPPVEPVAVFPPPPSPACGVYYPPP 703


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,908,185
Number of Sequences: 37544
Number of extensions: 97548
Number of successful extensions: 297
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2975543960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)