Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_O07
         (1011 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.                 31   6.6  
BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich syndrom...    31   6.6  
AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.         31   6.6  
AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.              31   6.6  
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.     31   6.6  

>D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 6.6
 Identities = 23/109 (21%), Positives = 30/109 (27%)
 Frame = +3

Query: 603 PXPPXXGSRXPPXSPXDXTXXPXPXXXXRXLSHSXPHKLPXPXETXXGLANPLKXSXXPX 782
           P PP  G   PP  P   +  P P    R      P + P         + P      P 
Sbjct: 279 PPPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPP 338

Query: 783 XSLXAPXVPXXLTXLXNNLXLXPSXRXXSXXXLSXPPHXXRXXXPXXPP 929
            +   P  P  L     +    P         ++ PP       P  PP
Sbjct: 339 PNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387


>BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich
           syndrome-like protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 6.6
 Identities = 23/109 (21%), Positives = 30/109 (27%)
 Frame = +3

Query: 603 PXPPXXGSRXPPXSPXDXTXXPXPXXXXRXLSHSXPHKLPXPXETXXGLANPLKXSXXPX 782
           P PP  G   PP  P   +  P P    R      P + P         + P      P 
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338

Query: 783 XSLXAPXVPXXLTXLXNNLXLXPSXRXXSXXXLSXPPHXXRXXXPXXPP 929
            +   P  P  L     +    P         ++ PP       P  PP
Sbjct: 339 PNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387


>AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 6.6
 Identities = 23/109 (21%), Positives = 30/109 (27%)
 Frame = +3

Query: 603 PXPPXXGSRXPPXSPXDXTXXPXPXXXXRXLSHSXPHKLPXPXETXXGLANPLKXSXXPX 782
           P PP  G   PP  P   +  P P    R      P + P         + P      P 
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338

Query: 783 XSLXAPXVPXXLTXLXNNLXLXPSXRXXSXXXLSXPPHXXRXXXPXXPP 929
            +   P  P  L     +    P         ++ PP       P  PP
Sbjct: 339 PNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387


>AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 6.6
 Identities = 23/109 (21%), Positives = 30/109 (27%)
 Frame = +3

Query: 603 PXPPXXGSRXPPXSPXDXTXXPXPXXXXRXLSHSXPHKLPXPXETXXGLANPLKXSXXPX 782
           P PP  G   PP  P   +  P P    R      P + P         + P      P 
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338

Query: 783 XSLXAPXVPXXLTXLXNNLXLXPSXRXXSXXXLSXPPHXXRXXXPXXPP 929
            +   P  P  L     +    P         ++ PP       P  PP
Sbjct: 339 PNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387


>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
          Length = 1315

 Score = 31.1 bits (67), Expect = 6.6
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
 Frame = +3

Query: 600 TPXPPXXGSRXPPXSPXDXTXXPXPXXXXR--XLSHSXPHKLPXPXETXXG 746
           TP PP   S  PP  P   T  P P          H   H+LP P +   G
Sbjct: 19  TPPPPPSESPPPPSPPPPSTPSPPPCSPDARPATPHLLHHRLPLPDDREDG 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,833,878
Number of Sequences: 237096
Number of extensions: 515463
Number of successful extensions: 1554
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13544414870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)