Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O06
(1028 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.047
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.047
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.047
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.19
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 33 0.25
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 33 0.25
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 33 0.44
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 33 0.44
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.8
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.3
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 3.1
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 30 3.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 30 3.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.1
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 5.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 7.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 7.1
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 29 7.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 7.1
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 25 8.2
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 28 9.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.047
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -3
Query: 852 GXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXX 673
G PP P PPPPP GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 672 XXPPPPPXXXXKXXPP 625
PPPPP PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -3
Query: 855 GGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXX 676
GG PP PPPPP GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGC 768
Query: 675 XXXPPPPPXXXXKXXPP 625
PPPPP K PP
Sbjct: 769 PPPPPPPPPGGFKGGPP 785
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 858 GGGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFX 679
GG PP P PPPPP GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 678 XXXXPPPPP 652
PPPPP
Sbjct: 781 KGGPPPPPP 789
Score = 25.4 bits (53), Expect(2) = 4.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 842 GXXPPPPPPP 871
G PPPPPPP
Sbjct: 756 GGPPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 851 PPPPPPP 871
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 842 GXXPPPPPP 868
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 839 GGXXPPPPP 865
GG PPPPP
Sbjct: 724 GGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.047
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -3
Query: 852 GXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXX 673
G PP P PPPPP GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 672 XXPPPPPXXXXKXXPP 625
PPPPP PP
Sbjct: 771 PPPPPPPGGFKGGPPP 786
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -3
Query: 855 GGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXX 676
GG PP PPPPP GG PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGC 768
Query: 675 XXXPPPPPXXXXKXXPP 625
PPPPP K PP
Sbjct: 769 PPPPPPPPPGGFKGGPP 785
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 858 GGGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFX 679
GG PP P PPPPP GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 678 XXXXPPPPP 652
PPPPP
Sbjct: 781 KGGPPPPPP 789
Score = 25.4 bits (53), Expect(2) = 4.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 842 GXXPPPPPPP 871
G PPPPPPP
Sbjct: 756 GGPPPPPPPP 765
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 851 PPPPPPP 871
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 842 GXXPPPPPP 868
G PPPPPP
Sbjct: 724 GGPPPPPPP 732
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 839 GGXXPPPPP 865
GG PPPPP
Sbjct: 724 GGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.047
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -3
Query: 852 GXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXX 673
G PP P PPPPP GG PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 672 XXPPPPPXXXXKXXPP 625
PPPPP PP
Sbjct: 354 PPPPPPPGGFKGGPPP 369
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -3
Query: 855 GGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXX 676
GG PP PPPPP GG PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP--GGC 351
Query: 675 XXXPPPPPXXXXKXXPP 625
PPPPP K PP
Sbjct: 352 PPPPPPPPPGGFKGGPP 368
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -3
Query: 858 GGGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFX 679
GG PP P PPPPP GG PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 678 XXXXPPPPP 652
PPPPP
Sbjct: 364 KGGPPPPPP 372
Score = 25.4 bits (53), Expect(2) = 4.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 842 GXXPPPPPPP 871
G PPPPPPP
Sbjct: 339 GGPPPPPPPP 348
Score = 23.8 bits (49), Expect(2) = 9.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 851 PPPPPPP 871
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 842 GXXPPPPPP 868
G PPPPPP
Sbjct: 307 GGPPPPPPP 315
Score = 22.2 bits (45), Expect(2) = 4.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 839 GGXXPPPPP 865
GG PPPPP
Sbjct: 307 GGPPPPPPP 315
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.9 bits (74), Expect = 0.19
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 10/92 (10%)
Frame = +2
Query: 626 GGXXFXXXXGGGGGXXXXXKKKXXGGGXXPPPPXXXXXXXXFFXXXKKKXXXXXXGGG-- 799
GG GGGGG GGG PPPP GGG
Sbjct: 28 GGGGCGGGCGGGGGCGGGG---GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Query: 800 --------GGXXXXXXXXXGXGGXXPPPPPPP 871
GG G GG PPPPPP
Sbjct: 85 CGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGG G GG PPPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGG G GG PPPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFMPPPPPPP 680
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.44
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGGGG G G PPPPPP
Sbjct: 17 GGGGGGGGGEAGYSGGAGVEAPPPPPP 43
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPPXXXXXXKKKK 901
GGGGG G G PPPPPPP +KK+
Sbjct: 50 GGGGGCGYGG----GYGCGIPPPPPPPPQCGCGRKKR 82
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = -3
Query: 843 PPXPXXXXXXXXXPPPPPXXXXXX--FFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXXX 670
PP P PPPPP G GG PPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 669 XPPPPPXXXXKXXP 628
PPPPP P
Sbjct: 347 MPPPPPPRYPSAGP 360
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
G G GG PP P PPPPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/74 (27%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = -3
Query: 843 PPXPXXXXXXXXXPPPPPXXXXXX--FFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXXX 670
PP P PPPPP G GG PPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 669 XPPPPPXXXXKXXP 628
PPPPP P
Sbjct: 357 MPPPPPPRYPSAGP 370
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
G G GG PP P PPPPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGGGG G GG PPPPPP
Sbjct: 23 GGGGGGYSGGG---GGGGDAAPPPPPP 46
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
GGGGGGG P P P P P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAP 57
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -3
Query: 801 PPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPPXXFFFXXXXXPPPPPXXXXKXXPPX 622
PP FF G GG PPP F PPPPP PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMF---AGGIPPPPPMMGGIPPPPP 109
Query: 621 XF 616
F
Sbjct: 110 MF 111
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Frame = -3
Query: 870 GGGGGGGXXP------PXPXXXXXXXXXPPPPP 790
GGGGGGG P P P PPPPP
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPP 57
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 8/35 (22%)
Frame = -3
Query: 870 GGGGGGG--------XXPPXPXXXXXXXXXPPPPP 790
GGGGGGG PP P PPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 720 GGGXXPPPXXFFFXXXXXPPPPP 652
GGG PPP F PPPPP
Sbjct: 44 GGGFGPPPPPFGPVGYALPPPPP 66
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
G GGG PP P PPPPP
Sbjct: 40 GNPCGGGFGPPPPPFGPVGYALPPPPP 66
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 833 GXGGXXPPPPPPP 871
G GG PPPPPPP
Sbjct: 1008 GPGGPPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 833 GXGGXXPPPPPPP 871
G GG PPPPPPP
Sbjct: 247 GPGGPPPPPPPPP 259
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXP--PPPPPP 871
GGGGG G GG PPPPPP
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRFPPPPPP 217
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
GGGGGGG P PPP P
Sbjct: 397 GGGGGGGEAAPPSSPPADAAPAPPPAP 423
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPP 868
GGGGG G GG PPP P
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAP 54
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPP---PPPPP 871
GGGGG G GG P PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPP 868
GGGGG G GG PPP P
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAP 54
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPP---PPPPP 871
GGGGG G GG P PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPP 793
GGGGG G PP P PPP
Sbjct: 22 GGGGGCGCAPPPPPACGCGGGAAPPP 47
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPPXXXXXXFFXXXKKXXKXXXXXXGGGGXXPPP 697
GGGGG G PP P PP P + GGGG PPP
Sbjct: 22 GGGGGCGCAPPPP---------PPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGGGG G G PP PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 870 GGGGGGGXXPPXPXXXXXXXXXPPPPP 790
GGGGGGG P P P PP
Sbjct: 100 GGGGGGGAAPTVPTRAAPRAPGPSGPP 126
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 791 GGGGGXXXXXXXXXGXGGXXPPPPPPP 871
GGGGG G G PP PP P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 25.4 bits (53), Expect(2) = 8.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 842 GXXPPPPPPP 871
G PPPPPPP
Sbjct: 198 GMAPPPPPPP 207
Score = 21.4 bits (43), Expect(2) = 8.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 854 PPPPPPXXXXXXKKKK 901
PPPPPP K K
Sbjct: 201 PPPPPPPPIDIPKDVK 216
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 870 GGGGGGGXXPPXP 832
GGGGGGG PP P
Sbjct: 26 GGGGGGGCCPPGP 38
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.0 bits (52), Expect(2) = 9.7
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = -3
Query: 705 PPPXXFFFXXXXXPPPPPXXXXKXXPP 625
PPP PPPPP + PP
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPP 152
Score = 21.4 bits (43), Expect(2) = 9.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = -3
Query: 861 GGGGXXPPXPXXXXXXXXXPPPPP 790
G G P P PPPPP
Sbjct: 104 GQEGHQVPAPQHGDHEASPPPPPP 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,690
Number of Sequences: 27780
Number of extensions: 308962
Number of successful extensions: 2917
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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