Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O02
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 35 0.014
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 34 0.024
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.39
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.52
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 1.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 2.1
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.8
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 27 4.8
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.4
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 26 6.4
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 6.4
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 8.5
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 35.1 bits (77), Expect = 0.014
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Frame = +2
Query: 233 TLEQQFNSLTKSKDAQD---FSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ 403
T+E ++SL KSK + F + ++ + +L N + + L + +A KA+++LEQ
Sbjct: 8 TIELDYDSL-KSKISNFNSIFDRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQ 65
Query: 404 SRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQKL 535
+ + E L K H + E+ + +EKL A ++ + S++L
Sbjct: 66 TEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 34.3 bits (75), Expect = 0.024
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 236 LEQQFNSLTKSKDAQDF---SKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 406
LEQ+ +L ++++A++ ++ + D S S +L A AK A DA A E ++
Sbjct: 109 LEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKK---AAQDAE-LASERAREA 164
Query: 407 RQNIERTAEELRK-AHPDVEKNATALRE 487
+ +IER+A K A + E+ ATALRE
Sbjct: 165 QSSIERSASLREKQAREEAERAATALRE 192
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +2
Query: 332 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 511
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 512 TVQESQKLAKKVSSNVQETNE 574
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 299 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 436
KDG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 QDFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIERTAE 433
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++ E
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQE 132
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 233 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 394
T++ + SL K D + ++ ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVER--REKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 395 LEQSRQNIERTAEE 436
LEQ+R +ERT E
Sbjct: 412 LEQARIELERTQRE 425
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 410 ASTVPKPPWPCRSRLRALPG 351
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 347 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 502
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.6 bits (56), Expect = 4.8
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +2
Query: 308 SESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE 487
S + + A K L GA KAKE ++ R +RTA E+RK +E+ R
Sbjct: 143 SRRISGMILAHFKRLSGA---DEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRA 199
Query: 488 KLQAAVQNTVQESQ 529
+ A Q + Q
Sbjct: 200 ERAAEAQRVAGKEQ 213
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 582 PSFSLVSCTFEDTFFANFWDSCTVFCT 502
PS L++ F+NF SC +FCT
Sbjct: 42 PSIPLINTHSNLCLFSNFSHSCFLFCT 68
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 6.4
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +2
Query: 380 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 535
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 536 AKKVSSNVQETNEKL 580
K + T +KL
Sbjct: 187 YKDMEQENASTIQKL 201
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 556
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRSS 188
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 395 LEQSRQNIERTAEELRKAHPDVEK 466
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 227 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANG---KAKEAL 397
H+T+ +Q + +A + ES L N ++ L ++N K +E +
Sbjct: 625 HQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV 684
Query: 398 EQSRQNIERTAEELRKA 448
+ +NI+ E+LRK+
Sbjct: 685 DSLEKNIQTLKEDLRKS 701
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,801,438
Number of Sequences: 5004
Number of extensions: 29961
Number of successful extensions: 154
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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