Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_O01
(968 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.057
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.057
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.13
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.13
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.31
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 31 0.93
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 31 0.93
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 25 3.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 25 3.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGX---GXXXPPPPPXPXGGXXXXP 801
PP GG L PPPPP S G G PPPPP P GG P
Sbjct: 730 PPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 802 P 804
P
Sbjct: 785 P 785
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 684 PPSPPXXXXSPXXXXXXXXXGXXXXPPPPPPXGXXXXLXP 803
PP PP P G PPPPPP G + P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGG 582
GG PP+ PPP PPP F PPP G
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 760 PPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGX---GXXXPPPPPXPXGGXXXXP 801
PP GG L PPPPP S G G PPPPP P GG P
Sbjct: 730 PPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 802 P 804
P
Sbjct: 785 P 785
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 684 PPSPPXXXXSPXXXXXXXXXGXXXXPPPPPPXGXXXXLXP 803
PP PP P G PPPPPP G + P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGG 582
GG PP+ PPP PPP F PPP G
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 760 PPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGX---GXXXPPPPPXPXGGXXXXP 801
PP GG L PPPPP S G G PPPPP P GG P
Sbjct: 313 PPPGG-----LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 802 P 804
P
Sbjct: 368 P 368
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 684 PPSPPXXXXSPXXXXXXXXXGXXXXPPPPPPXGXXXXLXP 803
PP PP P G PPPPPP G + P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGG 582
GG PP+ PPP PPP F PPP G
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 343 PPPPPPGGCPPP 354
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.057
Identities = 30/114 (26%), Positives = 33/114 (28%)
Frame = +1
Query: 463 PPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXG 642
PP + PPP PPP + PPP G G + P
Sbjct: 267 PPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Query: 643 GVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
G PPPPP G G PPPP P G PP
Sbjct: 326 G------PPGMGGMPPPPPP--------GMRYPGGMPPPPPPRYPSAGPGMYPP 365
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
PP G+ PPPPP + + G P PPP P G PP
Sbjct: 246 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG---MTPRPPPPPSSGMWPPPP 300
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.057
Identities = 30/114 (26%), Positives = 33/114 (28%)
Frame = +1
Query: 463 PPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXG 642
PP + PPP PPP + PPP G G + P
Sbjct: 277 PPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Query: 643 GVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
G PPPPP G G PPPP P G PP
Sbjct: 336 G------PPGMGGMPPPPPP--------GMRYPGGMPPPPPPRYPSAGPGMYPP 375
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
PP G+ PPPPP + + G P PPP P G PP
Sbjct: 256 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG---MTPRPPPPPSSGMWPPPP 310
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/107 (28%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Frame = +1
Query: 463 PPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXG 642
PP PPP PPP PPP G S PP G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAG 286
Query: 643 GVVXXSLXXXXXXXPPP---PPXXS-XLXXSXGXXXGXGXXXPPPPP 771
G PPP PP S + G G PPPPP
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 31.5 bits (68), Expect = 0.93
Identities = 27/111 (24%), Positives = 28/111 (25%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSP 633
G PP PPP PP PPP G L + SP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 634 PXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGG 786
P G PPPPP G PP P G
Sbjct: 322 PPAGT----------GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 362
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +1
Query: 562 PPPXXGGGXXGXXXLXXXXSXXSPPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXG 741
PPP G L S PP G S PPPPP S G
Sbjct: 238 PPPPP---PKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Query: 742 XGXXXPPPPPXPXGG 786
PPPP P G
Sbjct: 291 PPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/107 (28%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Frame = +1
Query: 463 PPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXG 642
PP PPP PPP PPP G S PP G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAG 307
Query: 643 GVVXXSLXXXXXXXPPP---PPXXS-XLXXSXGXXXGXGXXXPPPPP 771
G PPP PP S + G G PPPPP
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 31.5 bits (68), Expect = 0.93
Identities = 27/111 (24%), Positives = 28/111 (25%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSP 633
G PP PPP PP PPP G L + SP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 634 PXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGG 786
P G PPPPP G PP P G
Sbjct: 343 PPAGT----------GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 383
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +1
Query: 562 PPPXXGGGXXGXXXLXXXXSXXSPPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXG 741
PPP G L S PP G S PPPPP S G
Sbjct: 259 PPPPP---PKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Query: 742 XGXXXPPPPPXPXGG 786
PPPP P G
Sbjct: 312 PPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/107 (28%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Frame = +1
Query: 463 PPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXG 642
PP PPP PPP PPP G S PP G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-----PPTGSPPPPPAG 292
Query: 643 GVVXXSLXXXXXXXPPP---PPXXS-XLXXSXGXXXGXGXXXPPPPP 771
G PPP PP S + G G PPPPP
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 31.5 bits (68), Expect = 0.93
Identities = 27/111 (24%), Positives = 28/111 (25%)
Frame = +1
Query: 454 GGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSP 633
G PP PPP PP PPP G L + SP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 634 PXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGG 786
P G PPPPP G PP P G
Sbjct: 328 PPAGT----------GSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 368
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +1
Query: 562 PPPXXGGGXXGXXXLXXXXSXXSPPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXG 741
PPP G L S PP G S PPPPP S G
Sbjct: 244 PPPPP---PKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Query: 742 XGXXXPPPPPXPXGG 786
PPPP P G
Sbjct: 297 PPRAGSPPPPPPPRG 311
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
PP G++ + PPPPP L G PPPPP P G PP
Sbjct: 545 PPIAGLLAANGTNVPIPPPPPPPLPQNLS---------GAPPPPPPPPPMLGGPPPPP 593
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 427 PLFFFLXXXGGXPPLLXXXPPPXXXXXKXXXXXXXPPPXXFFFXXPPPXXGGGXXG 594
P+ L G P+ PPP PPP PPP GG G
Sbjct: 546 PIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 688 PPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
PPPP + L + G PPPPP P PP
Sbjct: 542 PPPPPIAGLLAANG--TNVPIPPPPPPPLPQNLSGAPPP 578
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 300 PPPPPPXXXPPPXGQKXXXKP 238
PPPPPP PPP +K +P
Sbjct: 817 PPPPPPLPPPPPSVEKKKLEP 837
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 300 PPPPPPXXXPPPXGQKXXXKP 238
PPPPPP PPP +K +P
Sbjct: 817 PPPPPPLPPPPPSVEKKKLEP 837
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 691 PPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGGXXXXPP 804
PPP + G G G PPPP P G PP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYALPPPP 65
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 25.0 bits (52), Expect(2) = 3.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 757 PPPPPXPXGG 786
PPPPP P GG
Sbjct: 66 PPPPPAPIGG 75
Score = 23.0 bits (47), Expect(2) = 3.4
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 688 PPPPXXSXLXXSXGXXXGXGXXXPPPPPXP 777
PP S G PPPPP P
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 757 PPPPPXPXGG 786
PPPPP P GG
Sbjct: 66 PPPPPAPIGG 75
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 688 PPPPXXSXLXXSXGXXXGXGXXXPPPPPXP 777
PP S G PPPPP P
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/90 (23%), Positives = 22/90 (24%)
Frame = +1
Query: 532 PPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXGGVVXXSLXXXXXXXPPPPPXXSX 711
P P F PP G +PP PPPP
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG 418
Query: 712 LXXSXGXXXGXGXXXPPPPPXPXGGXXXXP 801
S G G PPPP G P
Sbjct: 419 APGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 300 PPPPPPXXXPPPXGQ 256
PPPPPP PPP Q
Sbjct: 357 PPPPPPPPPPPPPPQ 371
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 757 PPPPPXPXGGXXXXPP 804
PPPPP P GG PP
Sbjct: 40 PPPPPPPCGGGYEAPP 55
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 685 PPPPPXXSXLXXSX--GXXXGXGXXXPPPPPXP 777
PPPPP L G G PPPPP P
Sbjct: 552 PPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPP 584
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 532 PPPXXFFFXXPPPXXGGGXXGXXXLXXXXSXXSPPXGGVVXXSLXXXXXXXPPPPP 699
PPP F PPP GG + PP G + PPPPP
Sbjct: 66 PPPVPNGFIPPPPGPGG-IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 631 PPXGGVVXXSLXXXXXXXPPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXG-GXXXXPP 804
PP G + PPPPP + PPPPP P G G PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGA-----PPPPPPPSGLGVAPQPP 130
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXG 783
PPP P G G G PPP P G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXG 783
PPP P G G G PPP P G
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXG 783
PP PP G G PP PP P G
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGG 786
PPPPP + G G PPPPP GG
Sbjct: 631 PPPPPPPPMGLPAVGA--GAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXGG 786
PPPPP + G G PPPPP GG
Sbjct: 457 PPPPPPPPMGLPAVGA--GAPPPPPPPPPSGAGG 488
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 133 PPPPPPPHYPPP 144
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 134 PPPPPPHYPPPP 145
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 31 PPPPPPMCAPPP 42
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 66 PPPPPPPMCPPP 77
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 67 PPPPPPMCPPPP 78
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 73 PPPPPPMPCPPP 84
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 3 PPPPPPPPPPPP 14
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 4 PPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 5 PPPPPPPPPPPP 16
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 6 PPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 3 PPPPPPPPPPPP 14
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 4 PPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 5 PPPPPPPPPPPP 16
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 6 PPPPPPPPPPPP 17
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 300 PPPPPPXXXPPP 265
PPPPPP PPP
Sbjct: 512 PPPPPPPPPPPP 523
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 685 PPPPPXXSXLXXSXGXXXGXGXXXPPPPPXPXG 783
PP PP G G PP PP P G
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,686,199
Number of Sequences: 27780
Number of extensions: 307392
Number of successful extensions: 4967
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3413
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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