Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N24
(952 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.14
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.42
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.55
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.73
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.96
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
P PPP PPPP G PPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 817 PPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
PPP P PPPP G PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
P P PP PPPP G PPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 818 PPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
PPP P PPP G G PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.015
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
P PPP PPP G PPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.3 bits (75), Expect = 0.026
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
P P PP PPP G PPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 34.3 bits (75), Expect = 0.026
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 846 PPGXXGGXAPPPPPPXXXXXXXXPPPP 766
PP G PPPPPP PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.9 bits (74), Expect = 0.034
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 846 PPGXXGGXAPPPPPPXXXXXXXXPPPP 766
P GG PPPPPP PPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPPXXXXXXXXXXGGGGPXPXP 666
PPPPP P P + PPPPP G GP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP-----PPPGVAGAGPPPPP 779
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 827 GXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPP 726
G PPPPPP PPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPP---------PPPPP 783
Score = 29.9 bits (64), Expect = 0.55
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 846 PPGXXGGXAPPPPPP 802
PPG G PPPPPP
Sbjct: 767 PPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = -2
Query: 582 PPPXXXFXGXXXPPPP---GGGGXXTXPPXKKXFWGGG 478
PPP G PPPP G G PP GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 843 PGXXGGXAPPPPPPXXXXXXXXPPPP 766
P G PPPPP PPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPX---GXGXGXLXPPPPPP 723
GG PPPPPP PPP G P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
PPPPPP PP G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 832 GGGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
G PPPPPP PPP PP PPP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
PPPPPP P G L PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
PPPPPP P PP G PPPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRS----APPPPPP 366
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
PPPPPP PP G PPPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRS----APPPPPP 366
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
PP PPP PP G PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPP 723
PP PPP PP G PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/75 (21%), Positives = 18/75 (24%)
Frame = +1
Query: 619 PPPPXKKKXXXXGXKRGXGXGPPPPXXXXXXXXXXGGGGGGXRXPXPXPXGGGXXXXXXX 798
PPP + + PPPP G G P P P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 799 XXGGGGGGXPPXXAR 843
G PP R
Sbjct: 353 LPPQGRSAPPPPPPR 367
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXG 755
G PPPPPP PPPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 778 PPPPXGXGXXXXXPPPPPPXXXXK 707
PPPP G PPPPPP K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 831 GGXAPPPPPPXXXXXXXXPPPP 766
G PPPPPP PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 778 PPPPXGXGXXXXXPPPPPP 722
PPPP G PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 846 PPGXXGGXAPPPPPP 802
PPG PPPPPP
Sbjct: 15 PPGFEPPSQPPPPPP 29
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.42
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +2
Query: 668 GXGXAPPPPXXXXFXXXXGGGGGGGXXXPPPPXGGGGXXXXXXXXGGGGGGAXPPXXPGG 847
G G PPP F G GG GG GG G G GG G P GG
Sbjct: 194 GGGSGGPPPGPGGF---GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = +2
Query: 722 GGGGGGGXXXPPPPXG----GGGXXXXXXXXGGGGGGAXPPXXPGG 847
GG GGG PP P G GG G GG G P GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Score = 29.1 bits (62), Expect = 0.96
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +2
Query: 725 GGGGGGXXXPPPPXGGGGXXXXXXXXGGGGGGAXPPXXPGG 847
GGG GG P GGG G GGG PGG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 723 GGGGGGXXXXXPXPXG-GGGXXXXXXXXGGGGGG 821
GG GGG P G GGG GG GGG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Frame = +2
Query: 668 GXGXAPPPPXXXXFXXXXGG-----GGGGGXXXPPPPXGGGGXXXXXXXXGGGGGGAXPP 832
G G PP P GG GG GG P GG G GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 833 XXPGG 847
PGG
Sbjct: 256 GGPGG 260
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 829 GGXPPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
G PPPP PPPP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 830 GGXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPP 729
G PPPP PPP G PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 680 APPPPXXXXFXXXXGGGGGGGXXXPPPPXGGGGXXXXXXXXGGG 811
APPPP F GGG G P GG G G G
Sbjct: 98 APPPPRGPLFGPRIGGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.96
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPPP 722
PPPPP PP P G PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGP---PSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPPP 725
P PPPP PP G PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 821 PPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPP 726
P PPPP PP G PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 822 APPPPPPXXXXXXXXPPPP 766
APPPPPP P PP
Sbjct: 4 APPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXG 755
PPPPPP P PP G
Sbjct: 5 PPPPPPAPAPAAAAPAPPLMTG 26
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 820 PPPPPPXXXXXXXXPPPPXGXGXXXXXPPPP 728
PP P P PPPP PP P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 827 GXPPPPPPXXXXXXXXXPPPXGXGXGXLXPPPPPPXXXXXXXXXXGGGGPXPXP 666
G PP PPP PP G PP PPP G P P P
Sbjct: 1187 GVPPVPPPSEA------PPVPKPSVGV--PPVPPPSTAPPVPTPSAGLPPVPVP 1232
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,184,599
Number of Sequences: 5004
Number of extensions: 36880
Number of successful extensions: 477
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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