Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N23
         (941 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       36   0.062
01_03_0005 + 11568545-11569119,11569179-11569191                       32   0.58 
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    30   2.3  
01_01_0401 + 3043634-3043894,3045610-3045849                           30   3.1  
07_01_0080 + 587674-588510                                             29   5.4  
11_06_0611 + 25461469-25461655,25461670-25462238                       28   9.4  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   9.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 35.5 bits (78), Expect = 0.062
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = -1

Query: 788 AXPPPXPXXXXXXXXPXXGXXEXPPXXGGGGXXKKKKXXPPPPPXXXKKK 639
           A PPP P        P  G    PP  G       K   PPPPP    KK
Sbjct: 325 APPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374



 Score = 31.9 bits (69), Expect = 0.76
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = -3

Query: 789 GXPPPPPXXXXXXXKXPXGXXXXPXXXXGGGXXKKKKXXXPPPXP 655
           G PPPPP         P G    P    GG     KK   PPP P
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGG-----KKGGPPPPPP 382



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = -1

Query: 782 PPPXPXXXXXXXXPXXGXXEXPPXXGGGGXXKKKKXXPPPPP 657
           PPP P        P       PP   G       K  PPPPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
 Frame = +1

Query: 658 GGGGGXXFFFFXXPPPP--XXGGXSXXPXXGFXXXXXXXGXGGG 783
           GGGGG     +  PPPP    GG S     G        G GGG
Sbjct: 80  GGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGG 123



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +2

Query: 656 GXGGGXXXFFFFXXPPPXXXXGXXXXPXGXXXXXXXXXGGGGG 784
           G GGG     +   PPP    G      G         GGGGG
Sbjct: 80  GGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGG 122


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
 Frame = -1

Query: 782 PPPXPXXXXXXXXPXXGXXEXPPXXG---GGGXXKKKKXXPPPPPXXXKKK 639
           PPP P        P       PP  G   GG     ++  PPPPP    KK
Sbjct: 113 PPPPPHLLHYYGHPPPPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKK 163


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 719 PPXXGGGGXXKKKKXXPPPPPXXXK 645
           PP  GGGG  K  +  PP PP   K
Sbjct: 19  PPGGGGGGGKKLHQSPPPSPPEAAK 43



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 716 PXXGGGGXXKKKKXXPPPPPXXXKK 642
           P  GGGG  KK    PPP P    K
Sbjct: 19  PPGGGGGGGKKLHQSPPPSPPEAAK 43


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 719 PPXXGGGGXXKKKKXXPPPPP 657
           PP  GG G  ++    PPPPP
Sbjct: 79  PPRLGGDGMFRRPPPPPPPPP 99


>11_06_0611 + 25461469-25461655,25461670-25462238
          Length = 251

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = -1

Query: 782 PPPXPXXXXXXXXPXXGXXEXPPXXGGGGXXKKKKXXPPPPP 657
           PPP P                PP   GGG         PPPP
Sbjct: 105 PPPLPRAETGRSAASRATAASPPVGSGGGEGATAAAVGPPPP 146


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/48 (31%), Positives = 16/48 (33%)
 Frame = -1

Query: 782 PPPXPXXXXXXXXPXXGXXEXPPXXGGGGXXKKKKXXPPPPPXXXKKK 639
           PPP P        P       PP        K+    PPPPP    KK
Sbjct: 714 PPPPPPPANRSNGPSAPAPPLPPPLPAAAN-KRNPPAPPPPPLMTGKK 760


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,460,666
Number of Sequences: 37544
Number of extensions: 361149
Number of successful extensions: 879
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)