Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N22
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0001 + 26976510-26977382                                         33   0.42 
08_02_1364 - 26415278-26415319,26415399-26415518,26415739-264158...    32   0.73 
02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797           30   2.2  
03_01_0320 - 2510907-2512190                                           30   2.9  
03_05_0096 + 20754478-20754584,20755548-20755677,20756212-207562...    29   6.8  
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879...    29   6.8  

>05_07_0001 + 26976510-26977382
          Length = 290

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 360 PRPSRVCAPRCRTALRTSASGPRTVEMATPSIRK*TFFPQKNPWNRF 500
           PRP R   PR  + L  S  GPR +     ++R  TFFP  +  NRF
Sbjct: 4   PRPCRFGRPRWPSILGLSPFGPRPIS----AVRSETFFPGTSDRNRF 46


>08_02_1364 -
           26415278-26415319,26415399-26415518,26415739-26415825,
           26416273-26416443,26416535-26416738
          Length = 207

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +2

Query: 344 AEAIRTAAVACLCSALQDSPQDERIRA---ENGGDGDTVDKEVNLFPTKKSLEPFLDEM 511
           A A R     C  +  QD+ +     A   +NGG    V+KE+ L  TK +L+  L++M
Sbjct: 126 ASASRPETTECPSNQNQDTTEQPAAGATEIQNGGKSSVVEKELKLQLTKDTLDKMLEDM 184


>02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797
          Length = 918

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 101 DKFVCTCLRHFQDKSSYIQVPNNKILQ-NNITRSVKDHPTVVKHLQNYNTIFWN 259
           DK  C C + F+   S   + ++ +    +++  +K H   V+H++N NT  WN
Sbjct: 251 DKVYCFCCKLFKSNQSKSLLASDGLKDWKHLSGRLKQHENSVEHIKNMNT--WN 302


>03_01_0320 - 2510907-2512190
          Length = 427

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -2

Query: 503 PKTVPRI-FLWEKGLLPYRRCRHLHRSRPGCARPEGCPAARSTDTRRPRCVS 351
           P   P++   W+ G      CR LH   P  A P      RS     P CV+
Sbjct: 28  PPAPPKVCHYWKSGRCSRNPCRFLHTDAPDPAPPIAAVNTRSNTWVNPSCVA 79


>03_05_0096 +
           20754478-20754584,20755548-20755677,20756212-20756268,
           20756741-20756794,20757610-20758287
          Length = 341

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 101 DKFVCTCLRHFQDKSSYIQVPNNKILQ-NNITRSVKDHPTVVKHLQNYNTIFWN 259
           D+ +C C + F  ++    + ++      +I+  +K+H   VKH+ N  +  WN
Sbjct: 227 DRVICFCCKIFNSRNCKSSLEHDGFRDWRHISERLKEHKASVKHITNMTS--WN 278


>02_04_0481 +
           23284296-23284448,23284553-23284753,23284855-23287971,
           23288510-23289353,23289468-23290120,23290573-23290676,
           23290898-23291000
          Length = 1724

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +2

Query: 383 SALQDSPQDERIRAENGGDGDTVDKEVNLFPTKKSLEPFLDEMVPLLMGLVEDNST 550
           SAL+ SP   R++++ GG  D V  E+   P++++  P  D    +L+ +  D++T
Sbjct: 22  SALRRSPPRVRVQSDEGGSSDGVLVEL---PSQEARSPGADPDGGVLVNMPADDAT 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,247,367
Number of Sequences: 37544
Number of extensions: 475087
Number of successful extensions: 1491
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)