Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N22
         (915 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.4  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         25   2.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   7.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.8  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 131 FQDKSSYIQVPNNKILQNNITRSVKDHPTVVKH 229
           F+D SSY  + N ++    +++ +K H   + H
Sbjct: 178 FRDNSSYYTIDNKRVHFKEVSKLLKQHGIDLDH 210


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 383 SALQDSPQDERIRAENGGDGDTVDKEVNLFPTKKSLEPFLDEMVPLLMGLVEDNSTLTRQ 562
           S L+     E+    NG + +  +      PT +SL+P L+  V  +  LVE    +  +
Sbjct: 55  SFLRAGVYPEKDTPANGDETEAEESGGESGPTGQSLDPQLERQVETIRNLVESYMRIVTK 114

Query: 563 HT 568
            T
Sbjct: 115 TT 116


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 167 NKILQNNITRSVKDH 211
           NK+L + IT+ VKDH
Sbjct: 544 NKVLSSVITQKVKDH 558


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 347 QRCDPPTISCFGIIISVE*RSQRIK*NFRCSKILCYNFGDA*RRWD 210
           Q+C     + F  ++SV+ R   +K   +C K++ ++   A  R D
Sbjct: 554 QKCCNKPCNIFQAVLSVKERVVDLKMKRKCGKLVSFDLSQAFDRVD 599


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,061
Number of Sequences: 2352
Number of extensions: 18220
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)