Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N22
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-5|AAB37930.1| 353|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical p... 29 4.6
Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical p... 29 6.1
Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical p... 29 6.1
Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical p... 29 6.1
Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical p... 29 6.1
Z81593-7|CAB63316.2| 400|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U80840-5|AAB37930.1| 353|Caenorhabditis elegans Hypothetical
protein F08D12.10 protein.
Length = 353
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 83 SLKFRSDKFVCTC-LRHFQDKSSYIQVPNNKILQNNITRSVKDHPTVVKHLQNYNTIFWN 259
S+ RS F +R+F D++SY + N +L +N T+ + T+ N W
Sbjct: 215 SVLHRSPDFALMAEMRYFVDEASYACITLNDLLVSNCTKLIITDSTLKSEELNIFLKHWI 274
Query: 260 NGSFILCAAISI 295
NGS C + +
Sbjct: 275 NGSIQTCEFLKL 286
>Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical
protein T13H5.6 protein.
Length = 475
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/72 (31%), Positives = 29/72 (40%)
Frame = -1
Query: 540 SSTRPMRSGTISSKNGSKDFFVGKRFTSLSTVSPSPPFSARMRSS*GLSCSAEHRHATAA 361
S+T S T + K VGK SLSTV PSP S +R S L + +
Sbjct: 372 STTSGSSSRTSGASLAHKTHIVGKGGISLSTVDPSPILSPGIRLSEQLGAKNQSYKSAFR 431
Query: 360 VRIASAVRPADH 325
V+ R H
Sbjct: 432 VQKTENARVISH 443
>Z75547-15|CAA99897.2| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 425 ENGGDGDTVDKEVNLFPTKKSLEPFLDEMVPLLMGLVEDNSTLTRQHTL 571
+N D D K ++ P K+ E +DE+V ++ L+ DN+++T TL
Sbjct: 196 DNWSDPDKKKKMLDRMPIKRFAE--VDEVVNAVLFLLSDNASMTTGSTL 242
>Z75527-10|CAJ80819.1| 251|Caenorhabditis elegans Hypothetical
protein R11D1.11 protein.
Length = 251
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 425 ENGGDGDTVDKEVNLFPTKKSLEPFLDEMVPLLMGLVEDNSTLTRQHTL 571
+N D D K ++ P K+ E +DE+V ++ L+ DN+++T TL
Sbjct: 196 DNWSDPDKKKKMLDRMPIKRFAE--VDEVVNAVLFLLSDNASMTTGSTL 242
>Z81107-11|CAJ90502.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 317 NMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDK 457
++ W EA +++ L S +DS + R+ EN G+G+ + K
Sbjct: 95 SLAWILSNGKEAAPESSIGSLTSLDRDSWAEARVELENAGNGEYLKK 141
>Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 317 NMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDK 457
++ W EA +++ L S +DS + R+ EN G+G+ + K
Sbjct: 265 SLAWILSNGKEAAPESSIGSLTSLDRDSWAEARVELENAGNGEYLKK 311
>Z73103-12|CAJ90500.1| 476|Caenorhabditis elegans Hypothetical
protein R07H5.2b protein.
Length = 476
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 317 NMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDK 457
++ W EA +++ L S +DS + R+ EN G+G+ + K
Sbjct: 95 SLAWILSNGKEAAPESSIGSLTSLDRDSWAEARVELENAGNGEYLKK 141
>Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 317 NMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDK 457
++ W EA +++ L S +DS + R+ EN G+G+ + K
Sbjct: 265 SLAWILSNGKEAAPESSIGSLTSLDRDSWAEARVELENAGNGEYLKK 311
>Z81593-7|CAB63316.2| 400|Caenorhabditis elegans Hypothetical
protein T20B3.13 protein.
Length = 400
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 708 SXHGVRTNLSLTSSRRFNTTKYILFNISAVXQPRW 604
S H V NL LTS +F+ T IL I++ + W
Sbjct: 309 SVHSVTENLYLTSIYKFSDTSIILGGIASTPKSIW 343
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = -1
Query: 591 AXQHTARRVCCLVNVELSSTRPMRSGTISSKNGSKDFFVGKRFTSLSTVSPSPPFSARMR 412
A HT +C +N +L + S S N F+G T S S S S+
Sbjct: 611 ASPHTLSNLCMKINSKLGGINVILSSPPQSLNSEPVLFIGCHLTRSSLASSSDSTSSIAH 670
Query: 411 SS*GLSC 391
++C
Sbjct: 671 CDSSIAC 677
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 540 SSTRPMRSGTISSKNGSKDFFVGKRFTSLSTVSPSPPFSARMRSS*G 400
SST P S + S G T+L+++SPSP S+ + SS G
Sbjct: 1090 SSTSPNPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQG 1136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,901,937
Number of Sequences: 27780
Number of extensions: 401827
Number of successful extensions: 1122
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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