Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N22
         (915 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 475 HKKILGTVFGRNGTAPHGSGGGQLDVDETAHSACRVLXRDFXAP 606
           HK +   +  R GT P          DET HSACR +  +F  P
Sbjct: 620 HKDVTQCISCRQGTVP----------DET-HSACRDIPEEFLRP 652


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +1

Query: 472 SHKKILGTVFGRNGTAPHGSGGGQLDVDETAH 567
           SH  +L  V+   G   H  G G   +  T H
Sbjct: 400 SHNNLLNNVYSTPGPHHHTMGHGHSHIHATPH 431


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 247 NILEQRKFYFMRCDLYSTEIIMPKHDMVG 333
           ++L   + Y+     YS+ IIM  H++ G
Sbjct: 263 SVLHALQLYYPHVPEYSSSIIMELHNIEG 291


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 247 NILEQRKFYFMRCDLYSTEIIMPKHDMVG 333
           ++L   + Y+     YS+ IIM  H++ G
Sbjct: 278 SVLHALQLYYPHVPEYSSSIIMELHNIEG 306


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,805
Number of Sequences: 438
Number of extensions: 5218
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)