Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N20
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 84 1e-16
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 82 5e-16
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 62 6e-10
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 60 3e-09
04_04_0122 - 22918146-22918220,22918455-22918496,22918586-229186... 53 3e-07
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 47 2e-05
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 6.7
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 29 6.7
12_01_0109 + 853043-853426,853653-853787,853866-854138 28 8.8
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 84.2 bits (199), Expect = 1e-16
Identities = 61/178 (34%), Positives = 84/178 (47%)
Frame = +3
Query: 246 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 425
H + + +L PNVR+R+ LR +Q + +IE KF+ E A R IVN
Sbjct: 47 HTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVN 106
Query: 426 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPRDPNVKGIPDFWY 605
G E D +E A +NAA EG +D + KG+PDFW
Sbjct: 107 GVVEV----------DGGNDEP---ASENAA--EG------------KDADAKGVPDFWL 139
Query: 606 NIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEFYFAPNEYFXIXYLLKS 779
+ +LSE +QE DEP LK L+DIK +DP F L+F+F N +F L K+
Sbjct: 140 TAMKTNEVLSEEIQERDEPALKYLKDIKWARIDDPKGFKLDFFFDTNPFFKNSVLTKT 197
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 82.2 bits (194), Expect = 5e-16
Identities = 60/178 (33%), Positives = 81/178 (45%)
Frame = +3
Query: 246 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 425
H + + SL P VR+R+ LR +Q + D+EAKF+ E A R IVN
Sbjct: 46 HTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVN 105
Query: 426 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPRDPNVKGIPDFWY 605
G E D +E A T E+K++ KG+P+FW
Sbjct: 106 GVVEV----------DGVTKEA-------ADETPAEQKEE------------KGVPEFWL 136
Query: 606 NIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEFYFAPNEYFXIXYLLKS 779
N +N +LSE +QE DE LK L+DIK +P F LEFYF N +F L K+
Sbjct: 137 NAMKNHEILSEEIQERDEEALKYLKDIKWYRISEPKGFKLEFYFDTNPFFKNSVLTKT 194
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 62.1 bits (144), Expect = 6e-10
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +3
Query: 582 KGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEFYFAPNEYFXI 761
KG+PDFW N +N +L+E + E DE LK L+DIK +DP F EF+F N +F
Sbjct: 208 KGVPDFWLNAMKNNEILAEEIHESDEEALKYLKDIKWCRIDDPKGFKFEFFFYTNPFFKN 267
Query: 762 XYLLKS 779
L K+
Sbjct: 268 QVLTKT 273
Score = 35.5 bits (78), Expect = 0.058
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 246 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSE 353
H + + SL P+VR+R+ L +Q + ++E KF+ E
Sbjct: 153 HVDVLESLAPSVRKRVDVLMEIQSQHDELEVKFFEE 188
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +3
Query: 582 KGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEFYFAPNEYFXI 761
KG+PDFW +N +L+E + E DE LK L+DIK +DP F EF+F N +F
Sbjct: 103 KGVPDFWLKAMKNNEILAEEIHESDEEALKYLKDIKWCRIDDPKGFKFEFFFDTNPFFKN 162
Query: 762 XYLLKS 779
L K+
Sbjct: 163 QVLTKT 168
Score = 41.9 bits (94), Expect = 7e-04
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Frame = +3
Query: 246 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 425
H + + SL P VR+R+ L +Q + ++EAKF E A R+ IV+
Sbjct: 29 HVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVS 88
Query: 426 GTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPRD------PNVKG 587
G E + E + L N + E + D++A++ +D + KG
Sbjct: 89 GVLEV-EGETEEREEKGVPDFWLKAMKNNEILAEEIHESDEEALKYLKDIKWCRIDDPKG 147
Query: 588 IP-DFWYN---IFRN--VSMLSEMMQEHDEPILKCLQDIKVQMH 701
+F+++ F+N ++ M+ E DEPIL+ +++ H
Sbjct: 148 FKFEFFFDTNPFFKNQVLTKTYHMIDEDDEPILEKAIGTEIEWH 191
>04_04_0122 -
22918146-22918220,22918455-22918496,22918586-22918642,
22918784-22918844,22919219-22919280,22919372-22919485,
22919565-22919636,22919824-22919874,22919990-22920112,
22921261-22921383
Length = 259
Score = 53.2 bits (122), Expect = 3e-07
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Frame = +3
Query: 483 EEELARAVQNAA--ITEGEEKKDD--KAIEPPRDPNVKGIPDFWYNIFRNVSMLSEMMQE 650
++E+ + + A + E E+K ++ + + R+ +K IPDFW F + ML E++ E
Sbjct: 36 QDEIEKVNEEACDKVLELEQKYNEVRRPVYVRRNKIIKQIPDFWLTAFLSHPMLGELLTE 95
Query: 651 HDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFXIXYLLKS 779
D+ I K L+ I V ED S +++ F+PN YF L K+
Sbjct: 96 DDQKIFKHLESIDVDDSEDIKSGYSITLTFSPNPYFEDTKLTKT 139
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +3
Query: 483 EEELARAVQNAA--ITEGEEKKDD--KAIEPPRDPNVKGIPDFWYNIFRNVSMLSEMMQE 650
++EL + + A+ + E E+K + + + R ++ IPDFW F + +LSE++ E
Sbjct: 41 QDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRSDVIQTIPDFWLTAFLSHPLLSELLTE 100
Query: 651 HDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFXIXYLLKS 779
D+ + K L+ + V +D S +++ F+ N YF L K+
Sbjct: 101 EDQKMFKYLESVDVDDSKDVKSGYSITLTFSENPYFEDKELTKT 144
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 411 ALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGE 533
A IV + EPN + N +D+T E+ A +NAA+T +
Sbjct: 685 AAIVTASEEPNGGDSANKLKDETMEDP---ATENAAMTNAD 722
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 353 FTVKLGLNVDKLLLKSSQGADSPTNIRG*GCHRFCMKAICDGRYHFIT 210
FT + L+ + LL ++ A+ T + G C++++CDG H +T
Sbjct: 177 FTFNISLSRENLLQVAAWDANLVTPHKRMGNAGLCLESLCDGSNHNVT 224
>12_01_0109 + 853043-853426,853653-853787,853866-854138
Length = 263
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 267 GMPSLLHEGDL*WPLSFHYGSRHFSTGVALVHHFXXXXXXLQTP 136
G+P L GD+ + L+F G+ H T VAL F Q+P
Sbjct: 129 GVPDLSEHGDV-YDLTFGLGADHPPTAVALRKEFQRIILYQQSP 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,458,301
Number of Sequences: 37544
Number of extensions: 416041
Number of successful extensions: 1079
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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