Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N20
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    96   3e-20
Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of...    47   2e-05
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   6.0  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 58/176 (32%), Positives = 84/176 (47%)
 Frame = +3

Query: 252 EAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGT 431
           + + +LP NV++R+ AL+ LQ + + IE+ FY  VH                R  IV G 
Sbjct: 17  DMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGE 76

Query: 432 YEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPRDPNVKGIPDFWYNI 611
            EP  ++   P  +  E ++LA                 KA E   DP+ KGI DFW   
Sbjct: 77  VEPTKEQIDTPILEGLEGDQLAELY--------------KAAEA--DPSAKGIKDFWLTA 120

Query: 612 FRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISFTLEFYFAPNEYFXIXYLLKS 779
            R   +++E ++EHD PIL  L D+     +DP  F +EF+FA N YF    L K+
Sbjct: 121 LRTHDLVAEAIEEHDVPILSYLTDVTTAASKDPAGFKIEFHFATNPYFKNQVLTKT 176


>Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical
           protein C27B7.1b protein.
          Length = 313

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 588 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFXIX 764
           I +FW   F N  +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYF   
Sbjct: 77  IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136

Query: 765 YLLKS 779
            + KS
Sbjct: 137 VITKS 141


>Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical
           protein C27B7.1a protein.
          Length = 312

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 588 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFXIX 764
           I +FW   F N  +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYF   
Sbjct: 77  IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136

Query: 765 YLLKS 779
            + KS
Sbjct: 137 VITKS 141


>AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of
           presenilin 2 protein.
          Length = 312

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 588 IPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFXIX 764
           I +FW   F N  +LS  + E  E +L  L+D++VQ  ED  S F +   F PNEYF   
Sbjct: 77  IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136

Query: 765 YLLKS 779
            + KS
Sbjct: 137 VITKS 141


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 365 ECMYFTVKLGLNVDKLLLKSSQGADSPTNI 276
           EC++ + K GLNVDK+L        +PT I
Sbjct: 188 ECLHISAKSGLNVDKVLEAIIDRVPAPTAI 217


>Z81123-2|CAB03365.1|  734|Caenorhabditis elegans Hypothetical
           protein T14D7.2 protein.
          Length = 734

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -1

Query: 488 FFFSVITPWVETFIIIRFICAIHNKSSLFIKRLVKFFI---FAFECMYFTVKLGLNVDKL 318
           + F +I P V T++++ F    + +  LFI   V+  I   FA  C   +    LN+++L
Sbjct: 648 YLFHMI-PVVLTYMLVPFPIYFNTQIPLFIHCFVQLLITYFFAIICTMVSELPALNIERL 706

Query: 317 LLKS 306
           LL S
Sbjct: 707 LLAS 710


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 459 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPRD 572
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 609  IFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPIS 716
            IF  V +  + +  +  P+L  L  ++V  H+DP S
Sbjct: 1145 IFEQVRLEKDRLPANSYPVLSKLSTVRVSQHDDPTS 1180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,721,042
Number of Sequences: 27780
Number of extensions: 374411
Number of successful extensions: 1134
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)