Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N16
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            92   2e-20
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    55   3e-09
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    38   3e-04
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   4.2  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    24   5.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 92.3 bits (219), Expect = 2e-20
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
 Frame = +2

Query: 320 TTIGVDFKIRTLEVNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFAN 499
           +TIG  F  +TL ++   VK +IWDTAGQER+ ++   YYRG    IVVYD+ N +SFA 
Sbjct: 55  STIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFAR 114

Query: 500 VKRWLHEIEQNCDV-VNKVLVGNKNDCPSRKVVVTEDAXRFA 622
            K W+ E+++     +   L GNK D  + +VV  E+A ++A
Sbjct: 115 AKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYA 156



 Score = 32.3 bits (70), Expect = 0.021
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 228 FKLLIIGDSGVGKSCLLLRF 287
           FKL+++G+S VGKS L+LRF
Sbjct: 25  FKLVLLGESAVGKSSLVLRF 44



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 648 ETSAKENINVXXMFLTIPK 704
           ETSAK  +NV  +FL I K
Sbjct: 165 ETSAKTAVNVNDIFLAIAK 183


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 54.8 bits (126), Expect = 3e-09
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +2

Query: 359 VNGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANV-KRWLHEIEQNC 535
           V+G +V L +WDTAGQE +  +    Y  T   ++ Y V +  SF NV  +W  EI+ +C
Sbjct: 49  VDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHC 108

Query: 536 DVVNKVLVGNKND 574
                +LVG K D
Sbjct: 109 PDAPIILVGTKID 121



 Score = 26.6 bits (56), Expect = 1.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 231 KLLIIGDSGVGKSCLLLRF 287
           K +++GD  VGK+C+L+ +
Sbjct: 8   KCVVVGDGTVGKTCMLISY 26


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 395 TAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVK-RWLHEIEQNCDVVNKVLVGNKN 571
           +AGQE +  +    Y  T   +V + V +  SF NVK +W+ EI  +C     +LVG + 
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 572 D 574
           D
Sbjct: 61  D 61


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 470 DVTNGESFANVKRWLHEIEQN 532
           D T  + + N+KRWL  + +N
Sbjct: 329 DTTGQQFYDNIKRWLDVVPEN 349


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +3

Query: 405 RRGSEQLQVPTTEGLTESSSCTMLPMESL 491
           R  S++ QVP T+ + E+ +  M+P+ ++
Sbjct: 315 RETSKEYQVPGTKTVLEAGTSVMVPVHAI 343


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,545
Number of Sequences: 2352
Number of extensions: 14800
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)