Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N14
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 33 0.21
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.63
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 1.9
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 30 1.9
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 30 1.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 1.9
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 30 1.9
AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical ... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.9
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.6
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 3.4
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.5
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.9
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.8
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 28 7.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 885 KGGGGGXXXGGGGGRXGXG 829
+GGGGG GGGGGR G G
Sbjct: 138 QGGGGGGRGGGGGGRGGDG 156
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGGR G G
Sbjct: 98 GGGGGGRGGGGGGRGGGG 115
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGGR G G
Sbjct: 115 GGGGGGRGGGGGGRGGGG 132
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 885 KGGGGGXXXGGGGGRXGXG 829
+GGGGG GGGGG G G
Sbjct: 104 RGGGGGGRGGGGGGGGGRG 122
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 97 GGGGGGGRGGGGGGRGGG 114
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 114 GGGGGGGRGGGGGGRGGG 131
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGG G GGGGGR G G
Sbjct: 91 GGGRGGGGGGGGGRGGGG 108
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGG G GGGGGR G G
Sbjct: 108 GGGRGGGGGGGGGRGGGG 125
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 626 PPXXXXXXXPXPHXEXKNXTXPPGGGXXRXPPPXKKXXPPPP 501
PP P P E ++ + G R PPP K PPP
Sbjct: 67 PPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPP 108
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 74 GGGGGGNYGGGGGNQGGG 91
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 52 GGGGGGGGGGGGGGFGGG 69
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGG + G G
Sbjct: 75 GGGGGNYGGGGGNQGGGG 92
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGG G GGGGG G G
Sbjct: 67 GGGNGGFGGGGGGNYGGG 84
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXG 835
GGGGG GGGGG G
Sbjct: 111 GGGGGQRQGGGGGGFG 126
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 99 GGGGGGNYGGGGGNQGGG 116
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 52 GGGGGGGGGGGGGGFGGG 69
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGG + G G
Sbjct: 100 GGGGGNYGGGGGNQGGGG 117
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGG G GGGGG G G
Sbjct: 67 GGGNGGFGGGGGGSGGGG 84
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXG 835
GGGGG GGGGG G
Sbjct: 136 GGGGGQRQGGGGGGFG 151
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GG GG GGGGGR G G
Sbjct: 158 GGNGGGGRGGGGGRGGGG 175
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GG GG GGGGGR G G
Sbjct: 123 GGWGGNNGGGGGGRGGGG 140
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 101 GGGGGYATGGGGGGGGGG 118
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 135 GGGGGGCGGGGGGGCGGG 152
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 142 GGGGGGGCGGGGGGCGGG 159
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 164 GGGGGGCGGGGGGGCGGG 181
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 172 GGGGGGCGGGGGGGCGGG 189
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 66 GGGGGGCGGGGGGCGGGG 83
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 86 GGGGGGCGGGGGGCGGGG 103
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 136 GGGGGCGGGGGGGCGGGG 153
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 143 GGGGGGCGGGGGGCGGGG 160
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 150 GGGGGGCGGGGGGCGGGG 167
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 157 GGGGGGCGGGGGGCGGGG 174
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 165 GGGGGCGGGGGGGCGGGG 182
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 110 GGGGGGCGGGGGGGCGGG 127
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 117 GGGGGGGCGGGGGGGGGG 134
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 103 GGGGGCGGGGGGGCGGGG 120
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 111 GGGGGCGGGGGGGCGGGG 128
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 125 GGGGGGCGGGGGGGCGGG 142
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 157 GGGGGGCGGGGGGGCGGG 174
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 84 GGGGGGCGGGGGGCGGGG 101
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 104 GGGGGGCGGGGGGCGGGG 121
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 111 GGGGGGCGGGGGGCGGGG 128
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 118 GGGGGGCGGGGGGCGGGG 135
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 125 GGGGGGCGGGGGGGCGGG 142
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 157 GGGGGGCGGGGGGGCGGG 174
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 84 GGGGGGCGGGGGGCGGGG 101
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 104 GGGGGGCGGGGGGCGGGG 121
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 111 GGGGGGCGGGGGGCGGGG 128
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 118 GGGGGGCGGGGGGCGGGG 135
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 482 GGGGGGGFGGGGGGFGGG 499
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 483 GGGGGGFGGGGGGFGGGG 500
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 52 GGGGGGGGGGGGGGFGGG 69
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 52 GGGGGGGGGGGGGGFGGG 69
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXG 835
GGGGG GGGGG G
Sbjct: 157 GGGGGQRQGGGGGGFG 172
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 249 GGGGGRGYGGGGGGGGYG 266
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 885 KGGGGGXXXGGGGGRXGXG 829
+GG GG GGGGG G G
Sbjct: 212 RGGSGGGGGGGGGGGYGSG 230
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 557 GGGXXRXPPPXKKXXPPPPRXXK 489
GGG R PPP + PPPPR K
Sbjct: 23 GGGKGR-PPPARPPPPPPPRGVK 44
>AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical
protein F53C3.3 protein.
Length = 239
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 885 KGGGGGXXXGGGGGRXGXG 829
+GGGGG GG GGR G G
Sbjct: 27 RGGGGGGARGGVGGRGGGG 45
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 879 GGGGXXXGGGGGRXGXG 829
GGGG GGGG R G G
Sbjct: 23 GGGGRGGGGGGARGGVG 39
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGG G G
Sbjct: 103 GGGGGYAAGGGGGGGGGG 120
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GGGGGR G
Sbjct: 331 GGGGGYSTGGGGGRADSG 348
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 599 PXPHXEXKNXTXPPGGGXXRXPPPXKKXXPPPP 501
P PH + PP G PPP PPPP
Sbjct: 77 PPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPP 109
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 593 PHXEXKNXTXPPGGGXXRXPPPXKKXXPPPPR 498
PH E +N PP PPP PPPPR
Sbjct: 174 PHCECENCPKPP------PPPPIPPPGPPPPR 199
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 593 PHXEXKNXTXPPGGGXXRXPPPXKKXXPPPPR 498
PH E +N PP PPP PPPPR
Sbjct: 174 PHCECENCPKPP------PPPPIPPPGPPPPR 199
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXG 835
GGGGG GGGGG G
Sbjct: 13 GGGGGGGGGGGGGEAG 28
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 563 PPGGGXXRXPPPXKKXXPPPPR 498
PP + PPP + PPPPR
Sbjct: 39 PPSPSRPQRPPPSRPQRPPPPR 60
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2
Query: 882 GGGGGXXXGGGGGR 841
GGGGG GGGGGR
Sbjct: 614 GGGGGFQSGGGGGR 627
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -2
Query: 630 PPXXXXXXXXPPPPPGKXKXXXPPGGGXXEXXPPXKK 520
PP PPPPP + PPG PP +
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -2
Query: 630 PPXXXXXXXXPPPPPGKXKXXXPPGGGXXEXXPPXKK 520
PP PPPPP + PPG PP +
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 563 PPGGGXXRXPPPXKKXXPPPPR 498
PP G PPP PPPPR
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPR 268
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 563 PPGGGXXRXPPPXKKXXPPPPR 498
PP G PPP PPPPR
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPR 289
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 563 PPGGGXXRXPPPXKKXXPPPPR 498
PP G PPP PPPPR
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPR 274
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 885 KGGGGGXXXGGGGGRXGXG 829
+GGGGG G GGG G G
Sbjct: 312 RGGGGGGGGGMGGGNRGYG 330
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GG GG GGGGG G G
Sbjct: 795 GGSGGGGGGGGGGSGGSG 812
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG GG GG G G
Sbjct: 798 GGGGGGGGGGSGGSGGGG 815
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXG 835
GGGGG GGGGG G
Sbjct: 88 GGGGGYGAGGGGGGGG 103
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
G GGG G GGGR G G
Sbjct: 62 GSGGGRGGGSGGGRGGSG 79
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 630 PPXXXXXXXXPPPPPGKXKXXXPP 559
PP PPPPPG K PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 630 PPXXXXXXXXPPPPPGKXKXXXPP 559
PP PPPPPG K PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPP 786
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 882 GGGGGXXXGGGGGRXGXG 829
GGGGG G GGG G G
Sbjct: 13 GGGGGASGGAGGGAPGGG 30
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 630 PPXXXXXXXXPPPPPGKXKXXXPP 559
PP PPPPPG K PP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPP 369
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 879 GGGGXXXGGGGGRXGXG 829
GGGG GGGGG G G
Sbjct: 189 GGGGGGMGGGGGSGGSG 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,380,312
Number of Sequences: 27780
Number of extensions: 202942
Number of successful extensions: 2430
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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