Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N12
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 25 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 24 2.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 24 2.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.7
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.7
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 25 8.1
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 25 8.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 8.2
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP PPPPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP PPPPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP PPPPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 25.0 bits (52), Expect(2) = 1.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 814 PPPPPPPXXXXKKKK 858
PPPPPPP K K
Sbjct: 202 PPPPPPPIDIPKDVK 216
Score = 24.2 bits (50), Expect(2) = 1.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 811 SPPPPPPP 834
+PPPPPPP
Sbjct: 200 APPPPPPP 207
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 743 PPPPPPXXXXXXXXXXXXXXXXXXPPPPPP 832
PPPPPP PPPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 743 PPPPPPXXXXXXXXXXXXXXXXXXPPPPPP 832
PPPPPP PPPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 464
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 811 SPPPPPPP 834
+PPPPPPP
Sbjct: 154 APPPPPPP 161
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 814 PPPPPPPXXXXKKK 855
PPPPPPP K
Sbjct: 157 PPPPPPPVSVPSSK 170
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 811 SPPPPPPP 834
+PPPPPPP
Sbjct: 154 APPPPPPP 161
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 814 PPPPPPPXXXXKKK 855
PPPPPPP K
Sbjct: 157 PPPPPPPVSVPSSK 170
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 740 GPPPPPPXXXXXXXXXXXXXXXXXXPPPPPP 832
GPPPPPP PPPPP
Sbjct: 550 GPPPPPPLPLDLLKGAVAGLKSVPGGPPPPP 580
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP S PPPPPP
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP S PPPPPP
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPP SPPPPPPP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPPP 146
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 APPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
AP PPP PPPPPPP
Sbjct: 109 APAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 745 PPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
PPPPP +PPPPP P
Sbjct: 27 PPPPPPPKPAPYVEQSAQPQQTAPPPPPAP 56
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 24.6 bits (51), Expect(2) = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 814 PPPPPPPXXXXKKKK 858
PPP PPP +KKK
Sbjct: 820 PPPLPPPPPSVEKKK 834
Score = 21.8 bits (44), Expect(2) = 8.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 811 SPPPPPPP 834
S PPPPPP
Sbjct: 815 SNPPPPPP 822
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 24.6 bits (51), Expect(2) = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 814 PPPPPPPXXXXKKKK 858
PPP PPP +KKK
Sbjct: 820 PPPLPPPPPSVEKKK 834
Score = 21.8 bits (44), Expect(2) = 8.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 811 SPPPPPPP 834
S PPPPPP
Sbjct: 815 SNPPPPPP 822
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 APPPPPXXXXXXXXXXXXXXXXXSPPPPPPP 834
APPP P PPPPPPP
Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 854 FFXXXXXGGGGGGGEXXXXXXXXXXXXXXXXXGGGGG 744
FF GGGGGGG GGGGG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGG 86
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 854 FFXXXXXGGGGGGGEXXXXXXXXXXXXXXXXXGGGGG 744
FF GGGGGGG GGGGG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGG 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,440,076
Number of Sequences: 27780
Number of extensions: 272048
Number of successful extensions: 4186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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