Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N09
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   5.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -2

Query: 654 NHLKTPQENRRAGTAAAMCGLAQSHKP 574
           N+++ PQ ++R    +A+C + + + P
Sbjct: 175 NYVEYPQNSKRNSEESAICAMLKENMP 201


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 420 QGTMYFIITYQCKGLLVTQPYQL 488
           +GT YF+  Y+ K + VT P  L
Sbjct: 662 EGTSYFLNDYKHKDVDVTLPLDL 684


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 467 SYTTLSVSVMNPHLMVRLFPQRDITDVLFLSAGT 568
           +YT+L +++ NP     L  +R   DV  L   T
Sbjct: 581 TYTSLQMAMKNPIEFTDLSNERKYEDVCVLKTDT 614


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 308 EKVYRNCRQHLLNLPAAVPKSIDFLNKSVNNIKLPPF 418
           E+V    R+ +   P AVPK I  L      +K  PF
Sbjct: 437 EQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPF 473


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 308 EKVYRNCRQHLLNLPAAVPKSIDFLNKSVNNIKLPPF 418
           E+V    R+ +   P AVPK I  L      +K  PF
Sbjct: 352 EQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPF 388


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 308 EKVYRNCRQHLLNLPAAVPKSIDFLNKSVNNIKLPPF 418
           E+V    R+ +   P AVPK I  L      +K  PF
Sbjct: 671 EQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPF 707


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,775
Number of Sequences: 438
Number of extensions: 4704
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)