Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N08
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    24   5.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.6  

>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 466 IIFQHNLLNCCSSVL 510
           ++ Q++LLNCC S++
Sbjct: 17  VVVQNSLLNCCRSLI 31


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 367 YQTMTILCFCVFL--Y*HGLTMMT*RNNKAYLWILIIFQHNLLNCCSSVL 510
           YQ  TI C C++L    H + +    NN  +  I  + + ++L+ C  ++
Sbjct: 235 YQPETIACACIYLTARKHNIPL---PNNPPWFVIFRVSEDDMLDVCYRIM 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,926
Number of Sequences: 2352
Number of extensions: 12969
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)