Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N08
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075270-1|AAL68137.1|  472|Drosophila melanogaster AT29216p pro...    48   1e-05
AE014297-4498|AAF56983.2|  472|Drosophila melanogaster CG15524-P...    48   1e-05
AY051720-1|AAK93144.1|  607|Drosophila melanogaster LD24980p pro...    29   8.7  
AE014298-2624|AAF48774.1|  607|Drosophila melanogaster CG7846-PA...    29   8.7  

>AY075270-1|AAL68137.1|  472|Drosophila melanogaster AT29216p
           protein.
          Length = 472

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
 Frame = +3

Query: 306 KKDITLIVNKVFESDSLRITLSDDDDPMFLCVLILTRIDYDDLKKQQGLLVDFDNFPAQL 485
           K+   L   +V   + L++ L++  D   + +  +    + DLK+ Q L V F  F   +
Sbjct: 42  KRSCLLYAERVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDNV 101

Query: 486 VKLLQQCAINNMFLIMQQTNPL--------QYYLEVVEHNEFKRLIHLSL 611
           V++L+ C    + L +   +           YYL+ VE   FK L+HLSL
Sbjct: 102 VRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLSL 151


>AE014297-4498|AAF56983.2|  472|Drosophila melanogaster CG15524-PA
           protein.
          Length = 472

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
 Frame = +3

Query: 306 KKDITLIVNKVFESDSLRITLSDDDDPMFLCVLILTRIDYDDLKKQQGLLVDFDNFPAQL 485
           K+   L   +V   + L++ L++  D   + +  +    + DLK+ Q L V F  F   +
Sbjct: 42  KRSCLLYAERVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDNV 101

Query: 486 VKLLQQCAINNMFLIMQQTNPL--------QYYLEVVEHNEFKRLIHLSL 611
           V++L+ C    + L +   +           YYL+ VE   FK L+HLSL
Sbjct: 102 VRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLSL 151


>AY051720-1|AAK93144.1|  607|Drosophila melanogaster LD24980p
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 426 DDLKKQQGLLVDFDNFPAQLVKLLQQCAINNMFLIMQQTNPLQ 554
           D++    GL+V+F+     + ++LQ C ++N   +   T P Q
Sbjct: 84  DNVNSNSGLMVEFEEQRLVVSRILQHCVVDNKNRLRVATPPQQ 126


>AE014298-2624|AAF48774.1|  607|Drosophila melanogaster CG7846-PA
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 426 DDLKKQQGLLVDFDNFPAQLVKLLQQCAINNMFLIMQQTNPLQ 554
           D++    GL+V+F+     + ++LQ C ++N   +   T P Q
Sbjct: 84  DNVNSNSGLMVEFEEQRLVVSRILQHCVVDNKNRLRVATPPQQ 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,567,256
Number of Sequences: 53049
Number of extensions: 547616
Number of successful extensions: 839
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)