Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N07
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 133 1e-31
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 133 1e-31
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 132 3e-31
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 132 3e-31
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 105 4e-23
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 105 4e-23
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 105 4e-23
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 86 3e-17
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 86 3e-17
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 76 4e-14
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 76 4e-14
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 76 4e-14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 63 3e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 60 2e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 60 2e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 60 2e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 2e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 60 3e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 60 3e-09
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 59 5e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 58 9e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 56 5e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 56 5e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 56 5e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 55 8e-08
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 53 3e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 7e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 7e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 7e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 50 2e-06
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 50 2e-06
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 50 2e-06
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 47 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 45 7e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 45 9e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 45 9e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 1e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 2e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 42 5e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 5e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 42 5e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 0.001
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 0.001
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 0.001
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.013
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.013
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.013
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.013
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.017
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.017
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.023
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 36 0.030
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.040
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 36 0.053
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.070
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 35 0.092
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 35 0.092
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.16
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.21
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.21
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.37
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.37
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.86
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.86
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.86
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.86
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 0.86
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 2.0
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 30 2.6
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 4.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC006774-5|AAF60618.1| 363|Caenorhabditis elegans Hypothetical ... 29 6.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 8.0
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 133 bits (322), Expect = 1e-31
Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
+D+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 444 MAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 620
+AA E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ 146
Query: 621 KNQRKGFCFITFESEQ 668
R+ F FI FE E+
Sbjct: 147 TKARRNFAFIVFEEEE 162
Score = 68.1 bits (159), Expect = 8e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 444 MAAGEHTINNKKVDPKKAKARHGKIFVG 527
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 133 bits (322), Expect = 1e-31
Identities = 62/136 (45%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
+D+K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 444 MAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 620
+AA E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ 146
Query: 621 KNQRKGFCFITFESEQ 668
R+ F FI FE E+
Sbjct: 147 TKARRNFAFIVFEEEE 162
Score = 68.1 bits (159), Expect = 8e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 444 MAAGEHTINNKKVDPKKAKARHGKIFVG 527
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 132 bits (319), Expect = 3e-31
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 434
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 435 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 587
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 588 ILEVEMPFDKTKNQRKGFCFITFESEQV 671
+ + + FDK + +GF F+TF+S++V
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 450 AGEHTINNKKVDPKKAKAR 506
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 456 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 635
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 636 GFCFITF 656
GF FITF
Sbjct: 87 GFGFITF 93
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 132 bits (319), Expect = 3e-31
Identities = 60/148 (40%), Positives = 93/148 (62%), Gaps = 9/148 (6%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 434
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 435 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 587
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 588 ILEVEMPFDKTKNQRKGFCFITFESEQV 671
+ + + FDK + +GF F+TF+S++V
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEV 187
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 450 AGEHTINNKKVDPKKAKAR 506
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 456 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 635
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 636 GFCFITF 656
GF FITF
Sbjct: 87 GFGFITF 93
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 105 bits (252), Expect = 4e-23
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 450 AGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILE 596
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 597 VEMPFDKTKNQRKGFCFITFE 659
E+ DK + +GF F+TF+
Sbjct: 143 SEIILDKATQKPRGFGFVTFD 163
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 450 AGEHTINNKKVDPKKAKAR 506
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 105 bits (252), Expect = 4e-23
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 450 AGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILE 596
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 597 VEMPFDKTKNQRKGFCFITFE 659
E+ DK + +GF F+TF+
Sbjct: 143 SEIILDKATQKPRGFGFVTFD 163
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 450 AGEHTINNKKVDPKKAKAR 506
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 105 bits (252), Expect = 4e-23
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RK+FVGGL+ TTD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 450 AGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILE 596
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+ +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 597 VEMPFDKTKNQRKGFCFITFE 659
E+ DK + +GF F+TF+
Sbjct: 143 SEIILDKATQKPRGFGFVTFD 163
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 74
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 450 AGEHTINNKKVDPKKAKAR 506
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 86.2 bits (204), Expect = 3e-17
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Frame = +3
Query: 318 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 497
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 498 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 644
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 645 FITFE 659
F+TF+
Sbjct: 121 FVTFD 125
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 450 AGEHTINNKKVDPKKAKAR 506
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
+R F+S+FG I ++ + D T + +GF F+TF +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 36
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 86.2 bits (204), Expect = 3e-17
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Frame = +3
Query: 318 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 497
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 498 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 644
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 645 FITFE 659
F+TF+
Sbjct: 121 FVTFD 125
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 450 AGEHTINNKKVDPKKAKAR 506
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
+R F+S+FG I ++ + D T + +GF F+TF +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGK 36
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 75.8 bits (178), Expect = 4e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 450 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 572
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 573 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
FGT+ +VE+ Q +G F+ +E ++
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKE 195
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 75.8 bits (178), Expect = 4e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 450 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 572
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 573 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
FGT+ +VE+ Q +G F+ +E ++
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKE 215
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 75.8 bits (178), Expect = 4e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 450 AGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFF 572
H + K VD K+A R K+ + G+++ + S D +R +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 573 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
FGT+ +VE+ Q +G F+ +E ++
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKE 216
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 437
R D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 438 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 596
+ + K + KA A IFVG L E+ + + + FS FG IL+
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 597 V-EMPFDKTKNQRKGFCFITFES 662
V ++ D KGF FI F S
Sbjct: 129 VPKIMRDVDSGTSKGFAFINFAS 151
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEE 65
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 62.9 bits (146), Expect = 3e-10
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 437
R D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 438 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 596
+ + K + KA A IFVG L E+ + + + FS FG IL+
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 597 V-EMPFDKTKNQRKGFCFITFES 662
V ++ D KGF FI F S
Sbjct: 139 VPKIMRDVDSGTSKGFAFINFAS 161
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEE 75
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQRKGFCFITF 656
+ D+ R G F+TF
Sbjct: 171 CSVLRDQDGKSR-GCAFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 225 SQAHNSAEAPGRXDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 398
+Q+ N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 399 FAFIVFKAPESIDKVMAAGEHTINNKKVD 485
+ F+ K S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 659
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T +
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 59.7 bits (138), Expect = 3e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 452
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 453 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ KG+ F+ FE+E+
Sbjct: 154 DE-DGFSKGYGFVHFETEE 171
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 237 NSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
+ AE + L+V L D L+ F +YG I S V TD N GRS+GF F+ F
Sbjct: 306 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 364
Query: 417 KAPE 428
+ PE
Sbjct: 365 EKPE 368
Score = 37.1 bits (82), Expect = 0.017
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 330 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 470
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 471 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 59.7 bits (138), Expect = 3e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 452
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 453 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ KG+ F+ FE+E+
Sbjct: 154 DE-DGFSKGYGFVHFETEE 171
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 237 NSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
+ AE + L+V L D L+ F +YG I S V TD N GRS+GF F+ F
Sbjct: 306 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 364
Query: 417 KAPE 428
+ PE
Sbjct: 365 EKPE 368
Score = 37.1 bits (82), Expect = 0.017
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 330 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 470
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 471 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAP 425
APG D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 426 ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 569
+ + + + + + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 570 FSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
FS+FGT+ V K + KG F+ F++E
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.0 bits (134), Expect = 9e-09
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +3
Query: 240 SAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 419
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 420 APESIDKVMAAGEHTINNKKV 482
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 452
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 453 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 612 DKTKNQRKGFCFITFESE 665
D N KG+ F+ FE+E
Sbjct: 179 DDEGNS-KGYGFVHFETE 195
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.0 bits (109), Expect = 9e-06
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 429 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 566
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 567 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
FS+FG I + D + + KGF F+ F +
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 43.2 bits (97), Expect = 3e-04
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 434
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 435 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 557
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+R+ FS FGTI ++ D+ + KGF F+ FE +
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 452
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 453 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
I+ + + DP +A +G IF+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 612 DKTKNQRKGFCFITFESE 665
D N KG+ F+ FE+E
Sbjct: 179 DDEGNS-KGYGFVHFETE 195
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 48.0 bits (109), Expect = 9e-06
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 429 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 566
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 567 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
FS+FG I + D + + KGF F+ F +
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQ 288
Score = 43.2 bits (97), Expect = 3e-04
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 434
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 435 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 557
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+R+ FS FGTI ++ D+ + KGF F+ FE +
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPE 394
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 57.2 bits (132), Expect = 2e-08
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +3
Query: 246 EAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 425
EA + + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 426 ESIDKVMAAGEHTINNKKVD 485
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +3
Query: 462 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 641
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 642 CFITFESE 665
ITF+S+
Sbjct: 69 ASITFDSK 76
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 55.6 bits (128), Expect = 5e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 431
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 432 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 557
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+++ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 449
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 55.6 bits (128), Expect = 5e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 431
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 432 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 557
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+++ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 449
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 55.6 bits (128), Expect = 5e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ES 431
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 432 IDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDE 557
++ M G + N + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+++ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 449
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 54.8 bits (126), Expect = 8e-08
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID- 437
D K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 438 -------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
KV+ H + K D + R K+F+G LS + +++ +R F++FG I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 597 VEMPFDKTKNQR 632
+ D+ R
Sbjct: 171 CSVLRDQDGKSR 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 468 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 647
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 648 ITF 656
+TF
Sbjct: 101 VTF 103
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 455
L V G+ ++TTD+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 456 EHTINNKKVDPKKAKARH-------GKIFVGGLSSEISDDEIRNFF-SEFGTILEVEMPF 611
+H I+ ++ D K R +IFVG L+ ++ + ++R F E + +E +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 612 DK-TKNQRKGFCFITFESEQ 668
D +GF F+T S +
Sbjct: 294 DVFIPKPFRGFAFVTLSSAE 313
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 425
GR ++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 426 ESIDKVMAAGEHTINNKKVDPKKAKAR 506
E+ +++++ G T+N V A+ R
Sbjct: 313 EAAERIVSKGSLTVNGLSVGLSIAQPR 339
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 169 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 224
Query: 450 AGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 602
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 662
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 217
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 169 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 224
Query: 450 AGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 602
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 662
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 217
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + + A
Sbjct: 146 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 201
Query: 450 AGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 602
E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 202 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES 662
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQT 194
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 225 SQAHNSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 404
SQ+ + E D + ++VG + + T +E+ HF G + + ++ D +G +GFA
Sbjct: 63 SQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFA 122
Query: 405 FIVFKAPESIDKVMAAGEHTINNK--KVDPKK 494
++ F E + +A + + + KVDPK+
Sbjct: 123 YVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +3
Query: 489 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 452
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 453 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 617
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 618 TKNQRKGFCFITFESE 665
KG F+ F+ +
Sbjct: 164 VTGLSKGVGFVRFDKK 179
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ +
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSN 423
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 437
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.8 bits (121), Expect = 3e-07
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF--------- 416
D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 417 -------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFS 575
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFA 145
Query: 576 EFGTILEVEMPFDKTKNQRKGFCFITFE 659
FG + EV + KG F+ ++
Sbjct: 146 TFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 243 AEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 419
A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 115 ASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------ 416
G + R L+VG L T+ + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 417 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSE 578
+A ++++K + N V+P + ++ RH +FVG LSSE+ + ++R F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 579 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
FG + + ++ D + KG+ F+++ +
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 449
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 450 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 557
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
IR F+ FG I EV + + +G+ F+ F+++
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNK 285
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.8 bits (121), Expect = 3e-07
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF--------- 416
D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 417 -------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFS 575
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFA 145
Query: 576 EFGTILEVEMPFDKTKNQRKGFCFITFE 659
FG + EV + KG F+ ++
Sbjct: 146 TFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 243 AEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 419
A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 115 ASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93
Query: 444 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 578
+A N + + + H + + E +DDE + + E
Sbjct: 94 LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 43.2 bits (97), Expect = 3e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 51.6 bits (118), Expect = 7e-07
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Frame = +3
Query: 234 HNSAEAPG--RXDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 398
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 399 FAFIVFKAPESIDKVMAA------GEHTI--------NNKKVDPK--------KAKARHG 512
+ F+ F ++ + +A G+ + N+++ K KA +
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
++VG +S + +D ++R+ FS +G I EV + K QR + F+ +E ++
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRI----FKTQR--YAFVRYEKKE 283
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 228 QAHNSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 407
Q NS +A D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF
Sbjct: 227 QVFNSTKA----DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAF 276
Query: 408 IVFKAPESIDKVM 446
+ ++ E K +
Sbjct: 277 VRYEKKECATKAI 289
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.6 bits (118), Expect = 7e-07
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Frame = +3
Query: 237 NSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---------------- 368
++A A + +FVG + +K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 369 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 527
T + F V F A ES++K + +H I KV KK + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 528 GLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQRKGFCFITFESE 665
L EI++D + FFS + G + V + DK + KGF F+ F+ +
Sbjct: 252 NLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQD 298
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 267 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 444 MAAGEHTINNKKVDPKKAK 500
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 51.6 bits (118), Expect = 7e-07
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 444 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 557
+A + + ++ A + + V L +I +
Sbjct: 83 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
IR+ F FG I ++++ D + R GF ITF +
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 429 SIDK 440
K
Sbjct: 179 DAQK 182
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/66 (19%), Positives = 30/66 (45%)
Frame = +3
Query: 471 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 650
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 651 TFESEQ 668
F E+
Sbjct: 72 EFWDEE 77
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 51.6 bits (118), Expect = 7e-07
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 444 MAAGEHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDE 557
+A + + ++ A + + V L +I +
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
IR+ F FG I ++++ D + R GF ITF +
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 429 SIDK 440
K
Sbjct: 324 DAQK 327
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/66 (19%), Positives = 30/66 (45%)
Frame = +3
Query: 471 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 650
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 651 TFESEQ 668
F E+
Sbjct: 217 EFWDEE 222
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 449
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 450 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 557
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
IR F+ FG I EV + + +G+ F+ F+++
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNK 172
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 504 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 449
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 450 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 557
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
IR F+ FG I EV + + +G+ F+ F+++
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNK 182
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 504 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 449
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 450 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 557
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 558 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
IR F+ FG I EV + + +G+ F+ F+++
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNK 253
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 504 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 623
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 237 NSAEAPGRXDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 410
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 411 VF 416
+
Sbjct: 150 EY 151
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 50.4 bits (115), Expect = 2e-06
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 416
R K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 417 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 518
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 519 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVY 674
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAF 373
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/102 (24%), Positives = 44/102 (43%)
Frame = +3
Query: 327 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 506
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 507 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 50.4 bits (115), Expect = 2e-06
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 416
R K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 417 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 518
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 519 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVY 674
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAF 373
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/102 (24%), Positives = 44/102 (43%)
Frame = +3
Query: 327 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 506
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 507 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 50.4 bits (115), Expect = 2e-06
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 416
R K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 417 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 518
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 519 -FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVY 674
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + +
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAF 373
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/102 (24%), Positives = 44/102 (43%)
Frame = +3
Query: 327 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 506
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 507 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 446
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 225 SQAHNSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 404
S + S+ R +FVG +S++ ++ +R F G + SI + D TG+ +G+
Sbjct: 3 SGGYKSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYG 62
Query: 405 FIVF 416
FI F
Sbjct: 63 FIEF 66
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
L V LS TT+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 522 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+++VG + + + L F G+I + + DP +G SRG+AF+ + E
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 453 GE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI----RNFFSEFGTILEVEMPFDK 617
+ H I+ K + ++F+G + S DEI + ++ +P D
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DN 319
Query: 618 TKNQRKGFCFITF 656
K + +GFCF+ F
Sbjct: 320 EKIKNRGFCFVDF 332
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.8 bits (106), Expect = 2e-05
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Frame = +3
Query: 249 APGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 428
A G D R LFV L TD+ L F G + + + G + +AF+ F
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 429 SIDKVMAA--GEHTINNKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIR 563
+ + G + + +P K +RH +FVG L SEI ++R
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 564 NFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
F +FG + E ++ D N+ KG+ F+++
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 446
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 459 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 633 KGFCFITFESEQ 668
+G+ F+ FE+++
Sbjct: 290 QGYAFVKFETKE 301
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 237 NSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
+ AE + L+V L D L+ F +YG I S V TD N GRS+GF F+ F
Sbjct: 246 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 304
Query: 417 KAPE 428
+ PE
Sbjct: 305 EKPE 308
Score = 37.1 bits (82), Expect = 0.017
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 330 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 470
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 471 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ + KGF F+ FE +
Sbjct: 291 DE-NGRSKGFGFVCFEKPE 308
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 446
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 237 NSAEAPGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
+ AE + L+V L D L+ F +YG I S V TD N GRS+GF F+ F
Sbjct: 243 HKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCF 301
Query: 417 KAPE 428
+ PE
Sbjct: 302 EKPE 305
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 483 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 663 EQ 668
E+
Sbjct: 107 EE 108
Score = 37.1 bits (82), Expect = 0.017
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 330 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 470
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 471 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 611
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 612 DKTKNQRKGFCFITFESEQ 668
D+ + KGF F+ FE +
Sbjct: 288 DE-NGRSKGFGFVCFEKPE 305
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 7e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 45.2 bits (102), Expect = 7e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 507 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVY 674
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + +
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAF 159
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 563
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETE 116
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 563
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 665
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETE 117
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 504 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 659
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 522 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 437
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 438 KVMA 449
+ +A
Sbjct: 232 RAIA 235
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 431
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 432 IDKVMAAGEHTINNKKV 482
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 GRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 431
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 432 IDKVMAAGEHTINNKKV 482
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 431
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 453 GEHTINNKK 479
T N K
Sbjct: 63 SNQTFFNSK 71
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 252 PGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 431
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 432 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 518
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 444 M 446
+
Sbjct: 113 L 113
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 252 PGRXDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 431
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 432 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 518
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 288 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 467
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 468 NNKKVD 485
++ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 288 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 467
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 468 NNKKVD 485
++ ++
Sbjct: 68 GSRYIE 73
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 444 M 446
+
Sbjct: 119 L 119
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 455
+FV + E T+ ++ D F YG+I++I++ D TG +G+A + ++ + ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 456 EHTI---NNKKVD 485
T N KVD
Sbjct: 117 NDTDLLGQNVKVD 129
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQK 107
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 416
L + LS++TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/59 (27%), Positives = 36/59 (61%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 656
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 267 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 446
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 447 AAGEH 461
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.017
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYG 344
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 608
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 455
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 456 EHTINNKKVDPKKAKARHGKIFVGG 530
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.030
Identities = 13/55 (23%), Positives = 32/55 (58%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVYM 677
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F + Y+
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYV 258
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.040
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 608
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.053
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 276 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 443
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 444 MAAGEHTINNKKVDPKKAKARHGK 515
A E + N + K+ R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 35.5 bits (78), Expect = 0.053
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 446
R +F+GG+ T ++L R G YG++ + + DP +G A + F ++ + +
Sbjct: 365 RTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAI 424
Query: 447 AAG----EHTINNKKVDPK 491
+ H NNK+V+ K
Sbjct: 425 SGRFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 441 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 593
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEI 350
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 35.5 bits (78), Expect = 0.053
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI-----NVKTD-----PNTGRSRGFAFIV 413
DDRK+ V +S + T +L+ F YG+I S KT P R+ G A I
Sbjct: 110 DDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATIT 169
Query: 414 FKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDD 554
FK E D+ A + K D + + GG +SDD
Sbjct: 170 FKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKKRGGKGLVLSDD 214
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.070
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 440
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.070
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 440
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.070
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 276 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 440
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 34.7 bits (76), Expect = 0.092
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +3
Query: 228 QAHNSAEAPGRXDDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTD 374
QA S++A ++RK+++GG++ E + E++ F YGEIE + V
Sbjct: 314 QAQESSDA--NLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDS 371
Query: 375 PNTGRSRGFAFIVFKAPESIDKVMAA 452
PN FAFI + + + A
Sbjct: 372 PNDTSKHAFAFITMRNKAGVKAIFEA 397
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.7 bits (76), Expect = 0.092
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFES 662
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRS 60
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 425
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.21
Identities = 31/129 (24%), Positives = 54/129 (41%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 633 KGFCFITFE 659
G + FE
Sbjct: 229 TGEGIVEFE 237
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 486 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.21
Identities = 31/129 (24%), Positives = 54/129 (41%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 632
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 633 KGFCFITFE 659
G + FE
Sbjct: 229 TGEGIVEFE 237
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 486 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 662
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 264 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 419
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 486 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 596
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 RXDDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 434
+ + ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+
Sbjct: 27 KVESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSV 84
Query: 435 DKVM 446
D ++
Sbjct: 85 DVLL 88
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGG 530
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGG 530
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKR 47
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGG 530
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 450 A-GEHTINNKKVDPKKAKAR-HGK 515
TI ++V+ A R H K
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNK 181
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 659
K++VGGL S+ + E+ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 659
K++VGGL S+ + E+ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 659
K++VGGL S+ + E+ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 270 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 449
R+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 450 A-GEHTINNKKVDPKKAKAR-HGK 515
TI ++V+ A R H K
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNK 181
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 629
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 630 RKGFCFIT 653
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 453 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 629
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 630 RKGFCFIT 653
GFC T
Sbjct: 88 GFGFCHFT 95
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 549 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 671
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 516 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 617
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 339 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 518
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 519 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 668
++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 279 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 446
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 282 VGGLSWETTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 434
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQ 64
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 513 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 668
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQR 46
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 679 YI*TCSDSNVMKQKPFLWFFVLSKGISTSKI 587
Y+ S+ ++ PF +FF+ S+G STSKI
Sbjct: 163 YVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AC006774-5|AAF60618.1| 363|Caenorhabditis elegans Hypothetical
protein Y46H3A.4 protein.
Length = 363
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +2
Query: 26 YYGPSFXTFASCILAFRCXQVACLPSFXFHSHXXAFIXVMAHHANFAQVSYHRQPA*W 199
Y+ F F SC+ ++ C P HSH + + +S+H A W
Sbjct: 274 YFAGFFPNFQSCLPTTIHMEIRCAPHNLIHSHLRRLLYANHNQITAIVMSHHVVRAVW 331
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 273 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 452
+LF+ L + +L++ F + +I+ ++ PN S+ AFI F E A
Sbjct: 639 QLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAFAK 695
Query: 453 GEH-TINNKKVDPKKAKARHGKIFV 524
+NN VD A+ + K+ V
Sbjct: 696 SNGLKVNNHLVDVFYARHQETKVDV 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,693,889
Number of Sequences: 27780
Number of extensions: 279784
Number of successful extensions: 1020
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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