Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N05
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 36 0.040
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 34 0.16
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 33 0.38
AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical... 31 1.1
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 30 2.0
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 30 2.7
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 30 2.7
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 30 2.7
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 29 3.5
Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.6
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 28 8.1
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 28 8.1
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 28 8.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.1
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.9 bits (79), Expect = 0.040
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 386 IRPTPPISKPIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQN--QPMIFQQVVQS 559
++ TPP +P+ + ++ A + P Q+ + QP+ Q VVQ+
Sbjct: 187 VQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVVQA 246
Query: 560 PVFVNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQQSQPLLIQNNPKGVP 721
P + A +Q P + Q V Q +P+ QQ+ + Q PK VP
Sbjct: 247 PPKPIVQQAPVVQQAPPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAPPKPVP 300
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 503 QQRTQVQNQPMIFQQVVQSPVFVNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQ-- 676
QQ VQ P Q VVQ+PV P+ QP + V+Q Q P+ Q
Sbjct: 182 QQPPVVQQTPPPQQPVVQAPVAQQAPPS---QPQQAQAQPVVQQAPPVQQASPKPVAQPV 238
Query: 677 QSQPLLIQNNPKGV 718
Q QP ++Q PK +
Sbjct: 239 QQQP-VVQAPPKPI 251
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 278 LLDIDTKCKPEISSSPQV--SPNYNHTGNPVMSQHTHRIRPTPPISKPIQGGYIKEEKFN 451
LLD + K +SS P V SP + PV+++ T +PP ++ ++ E+
Sbjct: 86 LLDFSSSDKSSLSSRPNVKDSPEEDEDAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEML 145
Query: 452 LPTSLENASVTFPEVIPQQRT 514
+ SL++A P P QR+
Sbjct: 146 VDMSLDDAPAAPPRK-PHQRS 165
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 33.1 bits (72), Expect = 0.28
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +2
Query: 278 LLDIDTKCKPEISSSPQVSPNYNHTGNPVMSQHTHRIRPTPPISKPIQGGYIKEEKFNLP 457
LLD + K +SS P SP + PV+++ T +PP ++ ++ E+ +
Sbjct: 86 LLDFSSSDKSSLSSRPD-SPEEDEDAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEMLVD 144
Query: 458 TSLENASVTFPEVIPQQRT 514
SL++A P P QR+
Sbjct: 145 MSLDDAPAAPPRK-PHQRS 162
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 320 SPQVSPNYNHTGNPVMSQHTHRIRPTPPISKPIQGGYIKEEKF-NLPTSLENASVTFPEV 496
SPQ+S N+ +M+ T + P PP PI G NL +N T PE
Sbjct: 520 SPQMSQQRNYPQLQMMASQTPSMAPLPPPMPPIVGSSSAISSIQNLLEKQQNQYETAPET 579
Query: 497 IPQQRTQVQNQPMIFQQVVQSPVFV 571
P+ Q I +QVV V V
Sbjct: 580 -PRWDRQEPEYQHIDEQVVAPDVVV 603
>AL033514-30|CAA22091.1| 313|Caenorhabditis elegans Hypothetical
protein Y75B8A.31 protein.
Length = 313
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Frame = +2
Query: 674 QQSQPLLIQNNPK---GVPFILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSSTXQ 844
Q ++ L+I +N + +P+I ++ ++ + V++ +N+ K Q L Y+ TP++ + T
Sbjct: 101 QWARRLIINDNLECGTQIPYIERAIENGWGVVVMNTNLNESKDQDLKYSRTPVEHAETVW 160
Query: 845 I 847
I
Sbjct: 161 I 161
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 30.7 bits (66), Expect = 1.5
Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 16/194 (8%)
Frame = +2
Query: 224 MTKLEQELTFVDNTNETGLLDIDTKCKPEISSSPQ-VSPNYNHTGNPVMSQHTHRIRPTP 400
M+++E+E+T +D D + SS + V+ +++ + +T P+
Sbjct: 234 MSEMEKEITRRSQNKNIKTIDDDGLAELIGGSSTRTVADDFSPFVDKSGLSYTAPAPPST 293
Query: 401 PISKPIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQNQPMIFQQV---VQS--PV 565
S P + FNLP P +PQQ Q N M VQ+ P+
Sbjct: 294 EKSAPKESLNQLRSSFNLPDDSTTVGPVGPSTVPQQSQQFANNSMFMANAGNFVQNAFPI 353
Query: 566 FVNL------GPAGNIQPMPDKRSNVIQVDNVPQ--ANKTSPL--KQQSQPLLIQNNPKG 715
V + G A Q M + N+ P N T+P Q + P +QN
Sbjct: 354 GVTMTPQATFGAAPGFQMMQPHQHNLFMQQPNPTFVNNGTNPFLQTQATLPNFVQNGT-- 411
Query: 716 VPFILKSSDSNFSP 757
P + S F+P
Sbjct: 412 APLVPTVSAQQFTP 425
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 58 VNKNNFQKHLIKFLLWFYGLRIVKNGY*SFYEC--GRFQCP-RHC 183
VNK N KH+I + ++ + N Y F+EC G +C RHC
Sbjct: 153 VNKKNKNKHMIDIVCKYFLEAVENNKYGWFWECPNGGEKCQYRHC 197
>Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical
protein F55H12.6b protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +2
Query: 236 EQELTFVDNTNETGLLDIDTKCKPEISSSPQVSPNY-------NHTGNPVMSQHTHRIRP 394
+QE +D NE L D D + SS Q+ N+ + N V+ + HRI P
Sbjct: 64 KQETLSIDTNNEINLRDDDDFMMMKEFSSNQILVNFLSQLDLPTNDVNRVLGKR-HRISP 122
Query: 395 TPPISKPIQGGYIKE---EKFNLPTSLENASVTFPEVIPQQRTQVQ 523
TP I+ + E + FN +L+N + I Q+ + Q
Sbjct: 123 TPTINSSVTPNEEHEPDLKMFNSGDTLQNFLIDIDNHIRQKNQESQ 168
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
Frame = +2
Query: 503 QQRTQVQNQ-PMIFQQVVQSPVFVNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQQ 679
QQ QNQ P + Q QS + + P ++ MP + + Q P ++QQ
Sbjct: 475 QQMRPPQNQAPQMMQNPQQSQIQMRGNPPQQMRGMPQQGPPMQQSQQPPPQMSQMRMQQQ 534
Query: 680 SQPLLIQNNPKGVPFILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSSTXQI---L 850
N+P+ + + +N + +Q N+ NP+ Q + + Q+
Sbjct: 535 QPQQPNMNSPQSQH---QRAPNNMN---MQQNLPNPQQQMRIPQAQNQMQQRIPQVSPQQ 588
Query: 851 LQMQRQDRRQHPYTH 895
+QMQ+Q P +H
Sbjct: 589 MQMQQQQNMNGPPSH 603
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 569 VNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQQSQP--LLIQNNPKGVPFILKSSD 742
VN I+P R ++Q+ N + +SP+ ++ +P L + + SS
Sbjct: 64 VNPKRMSTIEPQAPTREQLLQLQNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSS 123
Query: 743 SNFSPVLLQSNIINPKTQTLM 805
SN S ++ + P QT +
Sbjct: 124 SNGSSSSTDTSPVPPAPQTAL 144
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 569 VNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQQSQP--LLIQNNPKGVPFILKSSD 742
VN I+P R ++Q+ N + +SP+ ++ +P L + + SS
Sbjct: 433 VNPKRMSTIEPQAPTREQLLQLQNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSS 492
Query: 743 SNFSPVLLQSNIINPKTQTLM 805
SN S ++ + P QT +
Sbjct: 493 SNGSSSSTDTSPVPPAPQTAL 513
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 569 VNLGPAGNIQPMPDKRSNVIQVDNVPQANKTSPLKQQSQP--LLIQNNPKGVPFILKSSD 742
VN I+P R ++Q+ N + +SP+ ++ +P L + + SS
Sbjct: 443 VNPKRMSTIEPQAPTREQLLQLQNQMRCAASSPVPEEPRPTDLCAASTTTSTSSVASSSS 502
Query: 743 SNFSPVLLQSNIINPKTQTLM 805
SN S ++ + P QT +
Sbjct: 503 SNGSSSSTDTSPVPPAPQTAL 523
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 479 VTFPEVIPQQRTQVQNQPMIFQQVV-QSPVFVNLGPAGNIQPMPDKRSNVIQVDNVPQAN 655
V+ P ++ QQ Q M+ QQ+V Q P+ GP + M + +N +Q+ + PQ
Sbjct: 83 VSMP-MVQQQYMMPQMAQMMPQQIVMQQPIMTTAGPQMMMTQMA-QMANPVQLVS-PQPP 139
Query: 656 KTSPLKQQSQPLL 694
+P +QQ+ P +
Sbjct: 140 VQAPPQQQASPAI 152
>Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical
protein F49E12.12 protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 819 GVLVYINVCVFGLMIFDCNNTGEKLESELFNIKGTPL--GLFCIS 691
G LVY ++ +FG+ F C T LES N K + + +FCI+
Sbjct: 204 GFLVYYSLPIFGVSFFICATTYTYLESYDVNRKNSRVLERVFCIA 248
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 281 LDIDTKCKPEISSSPQVSPNYNHT---GNP-VMSQHTHRIRPTPP 403
L I ++ K SSS ++PNY+ T GNP M + I+P PP
Sbjct: 1577 LTIGSEKKNNQSSSSALNPNYDFTRTPGNPNRMQMSQNSIQPAPP 1621
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 28.3 bits (60), Expect = 8.1
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 18/140 (12%)
Frame = +2
Query: 392 PTPPI---SKPIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQNQPMIFQQV---V 553
P PP S P + FNLP P +PQQ Q N M V
Sbjct: 260 PAPPSTEKSAPKESLNQLRSSFNLPDDSTTVGPVGPSTVPQQSQQFANNSMFMANAGNFV 319
Query: 554 QS--PVFVNL------GPAGNIQPMPDKRSNVIQVDNVPQ--ANKTSPL--KQQSQPLLI 697
Q+ P+ V + G A Q M + N+ P N T+P Q + P +
Sbjct: 320 QNAFPIGVTMTPQATFGAAPGFQMMQPHQHNLFMQQPNPTFVNNGTNPFLQTQATLPNFV 379
Query: 698 QNNPKGVPFILKSSDSNFSP 757
QN P + S F+P
Sbjct: 380 QNGT--APLVPTVSAQQFTP 397
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 28.3 bits (60), Expect = 8.1
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 18/140 (12%)
Frame = +2
Query: 392 PTPPI---SKPIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQNQPMIFQQV---V 553
P PP S P + FNLP P +PQQ Q N M V
Sbjct: 260 PAPPSTEKSAPKESLNQLRSSFNLPDDSTTVGPVGPSTVPQQSQQFANNSMFMANAGNFV 319
Query: 554 QS--PVFVNL------GPAGNIQPMPDKRSNVIQVDNVPQ--ANKTSPL--KQQSQPLLI 697
Q+ P+ V + G A Q M + N+ P N T+P Q + P +
Sbjct: 320 QNAFPIGVTMTPQATFGAAPGFQMMQPHQHNLFMQQPNPTFVNNGTNPFLQTQATLPNFV 379
Query: 698 QNNPKGVPFILKSSDSNFSP 757
QN P + S F+P
Sbjct: 380 QNGT--APLVPTVSAQQFTP 397
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 176 DIAEIEDFLNNCDGDFMTKLEQELTFVDNTNETGLLDIDTKCKPEISS 319
D++++E N D +T +TFVDNT+ ++ + C E SS
Sbjct: 97 DVSDLESVWKNVKPDELTYNRLVVTFVDNTDSKSNIECEI-CTLEFSS 143
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +2
Query: 596 QPMPDKRSNV--IQVDNVPQANKTSP--LKQQSQPLLIQNNPKGVPF 724
+P P+K+ N+ QV + Q+ T P L + ++ L+ Q NP G+PF
Sbjct: 298 EPQPEKQKNLPHAQVLLLAQSLLTQPQILAKLAEVLIPQGNPFGLPF 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,221,152
Number of Sequences: 27780
Number of extensions: 479735
Number of successful extensions: 1525
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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