Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N04
(958 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 144 9e-35
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 142 5e-34
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 112 5e-25
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 82 7e-16
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 66 5e-11
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 34 0.19
08_01_0622 + 5429317-5429403,5429673-5429765,5429950-5430030,543... 31 1.4
06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 30 2.4
08_02_0881 - 22216657-22216780,22216918-22217056,22217120-222171... 30 3.1
05_06_0211 + 26401495-26402224,26402932-26403014,26403295-264033... 29 5.5
01_01_0710 + 5492389-5492745,5493664-5493948,5494121-5494438,549... 29 7.2
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 28 9.6
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 28 9.6
01_03_0045 + 11929624-11929890,11930500-11930551,11932683-119331... 28 9.6
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 144 bits (349), Expect = 9e-35
Identities = 71/178 (39%), Positives = 104/178 (58%)
Frame = +3
Query: 15 QLTIGNSLRFYTLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLA 194
+L + F E WV K+++YNV GGK RG++ V +Y L + V +E LA
Sbjct: 81 ELLNDRAFNFDFTEETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLA 140
Query: 195 RVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKI 374
V GWC E LQA ++ DDI D + TRR CWY++P VG+ AIND +L+ + I+K
Sbjct: 141 CVLGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVGMSAINDGVLLKCHVQAIIKR 200
Query: 375 YFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSF 548
YF + + D+++++NE L T+MGQ LD H +D + + + Y IVKYKTS+
Sbjct: 201 YFKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSY 258
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 142 bits (343), Expect = 5e-34
Identities = 66/157 (42%), Positives = 99/157 (63%)
Frame = +3
Query: 78 KVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIM 257
K+L+YNV GGK RGI+ + ++++ + + + +E LA GWC E LQAY ++ DDIM
Sbjct: 70 KMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIM 129
Query: 258 DGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLY 437
D S TRRG PCW+R+P VGL A+ND I++ I IL+ +F Y D++D+FNE
Sbjct: 130 DNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKLYYVDLIDLFNEVEFK 189
Query: 438 TSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSF 548
T+ GQ LD H ++D + + + IV+YKT++
Sbjct: 190 TASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAY 226
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 112 bits (269), Expect = 5e-25
Identities = 64/160 (40%), Positives = 90/160 (56%)
Frame = +3
Query: 69 WVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 248
W++ +L+YNV GG+K +L KP N T GW LQAY ++ D
Sbjct: 46 WLESMLDYNVLGGEK-----NMLFRNNATKPNNGTLRY-------GW---QLQAYFLVLD 90
Query: 249 DIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEA 428
DIMD S TRRG PCW+R+P VGL AIND +++ I I + YF Y D+LD+FNE
Sbjct: 91 DIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEV 150
Query: 429 LLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSF 548
+ T+ GQ LD + ++D + +Y IV+YKT++
Sbjct: 151 EIQTTSGQLLDQITTNEGRKDLN-----KYRRIVEYKTAY 185
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 81.8 bits (193), Expect = 7e-16
Identities = 51/160 (31%), Positives = 88/160 (55%)
Frame = +3
Query: 69 WVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 248
W+ ++L+YNV GGK RG++ V +Y+L + +++E + LA G C ++ + L+++
Sbjct: 47 WIDRMLDYNVPGGKCNRGLSVVDSYKLLKGTNVLSQEDMFLASTLG-CFKLTFSCLMISW 105
Query: 249 DIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEA 428
I+ + VG AIND I++ I +L+++F YAD+LD+FNE
Sbjct: 106 MILT-------------LDVVGSIAINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEV 152
Query: 429 LLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSF 548
T+ GQ LD H ++D + + + IV+YKTS+
Sbjct: 153 EFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSY 192
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 65.7 bits (153), Expect = 5e-11
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +3
Query: 309 VGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQ 488
VGL IND I++ I ++K YF + + DIL+I++E L TS+GQ LD H
Sbjct: 191 VGLRGINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGAD 250
Query: 489 DYSLFTTERYYSIVKYKTSF 548
D + ++ E Y IVKYKT++
Sbjct: 251 DLAKYSIEGYRRIVKYKTAY 270
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 57 ELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYL 236
E W+ ++++YNV GGK RG++ + +Y L ++ VTE+ LA V G C + + YL
Sbjct: 80 EARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLG-CFKHVHYYL 138
Query: 237 I 239
+
Sbjct: 139 M 139
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 120 GITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGV 284
G+ T+LA +L + +N+ E TEM+ +++DD++D + TRRGV
Sbjct: 158 GVLTILANKLRTRQQNIAE-----------ITEMIHVASLLHDDVLDDADTRRGV 201
>08_01_0622 +
5429317-5429403,5429673-5429765,5429950-5430030,
5430166-5430237,5430379-5430495,5430585-5430671,
5431126-5431200,5431442-5431566,5432489-5432621,
5432719-5432808,5433210-5433389
Length = 379
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 123 ITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGV 284
I+ +A + + E +RLA + TE++ +++DD++D ++TRRG+
Sbjct: 120 ISMDMADPIVGSKNEIRERYMRLAEI----TELIHVTSLIHDDVLDDANTRRGM 169
>06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053
Length = 1613
Score = 30.3 bits (65), Expect = 2.4
Identities = 28/96 (29%), Positives = 43/96 (44%)
Frame = -1
Query: 433 RRASLKMSRMSAYSLAFPKYILSISYIEP*TSMASLMAPRPTSGMRYQHGTPRRVDDPSI 254
R +K SA +L K++L+ + E T +S+ RP+SG++ HG R +
Sbjct: 1312 RETLIKKLPSSAANLTCLKHLLA-GHKEQLTRTSSVKFLRPSSGLKMSHGVIRNMAKLQS 1370
Query: 253 ISSFIIKYACSISVHQPATRANLTISSVTFSGFSNN 146
+ IK S+ + A NL SV F G N
Sbjct: 1371 LVHVEIKEHPSV-FQEIALLQNLRKLSVLFYGIEVN 1405
>08_02_0881 -
22216657-22216780,22216918-22217056,22217120-22217192,
22218260-22218357,22218516-22218542,22218625-22218715,
22218819-22218900,22219983-22220098
Length = 249
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 258 DGSSTRRGVPCWYRMPDVGLGAINDA 335
DGS T + WYR P++ LGA N A
Sbjct: 196 DGSFTNHVITLWYRPPELLLGATNYA 221
>05_06_0211 +
26401495-26402224,26402932-26403014,26403295-26403369,
26403442-26403513,26403684-26403764,26403946-26404043,
26404694-26404819,26404931-26404979,26405352-26405547,
26406475-26406491,26406786-26406839,26406845-26407036
Length = 590
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 QFSLQLTIGNSLRFYTLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELF 152
+F + L+ SL FY LGS + + EY+ + G+K++ Y ++
Sbjct: 514 KFPVSLSFDLSLAFYPASVLGSSIFRDTEYSSRTGRKLKAGNGSFKYPIY 563
>01_01_0710 +
5492389-5492745,5493664-5493948,5494121-5494438,
5494900-5495127,5495884-5495984,5496493-5496604,
5496654-5496662,5496897-5497340,5497649-5497909
Length = 704
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 270 TRRGVPCWYRMPDVGLGAINDAILV--YGSIYEILKIYFGK 386
T R V WYR P++ LGA N + V + S + ++Y GK
Sbjct: 272 TSRVVTLWYRPPELLLGATNYGVAVDLWSSGCILAELYAGK 312
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 102 GGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRG 281
GGK++R L + + E R+A EM+ +++DD++D S RRG
Sbjct: 180 GGKRLRPALVFLVSRATAELAGLLELTTEHQRLAE-IIEMIHTASLIHDDVIDDSGMRRG 238
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 102 GGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRG 281
GGK++R L + + E R+A EM+ +++DD++D S RRG
Sbjct: 70 GGKRLRPALVFLVSRATAELAGLLELTTEHQRLAE-IIEMIHTASLIHDDVIDDSGMRRG 128
>01_03_0045 +
11929624-11929890,11930500-11930551,11932683-11933103,
11933574-11934162
Length = 442
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 270 STTRPLYRRSLSSTPVAFPYTNR--RHVLTS--PSLR*RFPVSRIIHKRAPLLCP 118
S + +R++ ++ P F T+R R TS PS+R +SR+ H++ CP
Sbjct: 340 SLSNATHRKARATPPKVFESTDRERRSPPTSINPSMRPHVSLSRVAHRKVRATCP 394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,362
Number of Sequences: 37544
Number of extensions: 331466
Number of successful extensions: 917
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -