Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N04
         (958 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   7.8  
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      24   7.8  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 149  IRETGKRYRRDGEVSTCRRLVYGNATGVLDNERRYNGRVVDPAR 280
            +R  G+RYRR   V   RR + G++ G + ++   +G +V+ +R
Sbjct: 1141 VRSLGERYRRQLLVVEERRQISGHSVGGVTSQE--DGTLVEASR 1182


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 173 RRDGEVSTCRRLVYGNATGVLDNERRYNGRVVDPARGPVLVP 298
           RR  E  +  RL  G+   +L + RR+ G  V+ +   VL+P
Sbjct: 145 RRINEYQSDGRLAEGSRQMLLRHMRRFEGYPVNISLSSVLLP 186


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 528 RSNNIAPS*TDCSLVCCGAPWRN 460
           R N+ AP  T+C++ C GA W N
Sbjct: 251 RDNDGAP--TNCAVTCEGAWWYN 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,200
Number of Sequences: 2352
Number of extensions: 12987
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105016554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)