Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_N03
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3145|AAF46684.2|  108|Drosophila melanogaster CG30389-P...    38   0.018
AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-P...    38   0.018
AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-P...    38   0.018
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    31   2.8  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    31   2.8  
AE014134-3591|AAF57263.1|  232|Drosophila melanogaster CG16937-P...    30   4.9  
AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA...    30   4.9  

>AE013599-3145|AAF46684.2|  108|Drosophila melanogaster CG30389-PB,
           isoform B protein.
          Length = 108

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 194 MKRRNAEPGKIRRPMKRTKIT 256
           MKRRNA+ GK+RRP+KR KIT
Sbjct: 1   MKRRNADCGKLRRPIKRNKIT 21


>AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-PC,
           isoform C protein.
          Length = 980

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 194 MKRRNAEPGKIRRPMKRTKIT 256
           MKRRNA+ GK+RRP+KR KIT
Sbjct: 1   MKRRNADCGKLRRPIKRNKIT 21


>AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-PA,
           isoform A protein.
          Length = 980

 Score = 37.9 bits (84), Expect = 0.018
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 194 MKRRNAEPGKIRRPMKRTKIT 256
           MKRRNA+ GK+RRP+KR KIT
Sbjct: 1   MKRRNADCGKLRRPIKRNKIT 21


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/69 (27%), Positives = 23/69 (33%)
 Frame = +3

Query: 360 PGPSGLCRXXXITPXSTPGLAFSKXXPICXPXPXXXYFFXFXPGXNXFXGXXPXXXGPXP 539
           PGP G        P   PG  + +  P   P P     + + P      G  P    P P
Sbjct: 213 PGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPLP 272

Query: 540 VXTXXPXKG 566
           V    P KG
Sbjct: 273 VPVPWPSKG 281


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/69 (27%), Positives = 23/69 (33%)
 Frame = +3

Query: 360 PGPSGLCRXXXITPXSTPGLAFSKXXPICXPXPXXXYFFXFXPGXNXFXGXXPXXXGPXP 539
           PGP G        P   PG  + +  P   P P     + + P      G  P    P P
Sbjct: 215 PGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYPPPGPYPGPWIPLP 274

Query: 540 VXTXXPXKG 566
           V    P KG
Sbjct: 275 VPVPWPSKG 283


>AE014134-3591|AAF57263.1|  232|Drosophila melanogaster CG16937-PA
           protein.
          Length = 232

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = +2

Query: 527 WAPXXXXPXPXKRXLXSPXAXFPPPXXLXGXPXPXGXPGXXXP 655
           WAP    P P +    SP    PPP      P P   P    P
Sbjct: 169 WAPTAGQPMPAQTPKESPLPKTPPPTQPPAPPLPLTPPTTQPP 211


>AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA
           protein.
          Length = 119

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
 Frame = -1

Query: 698 GGXXGXPXXGXXXXXXRXPXGXXRG---GGPPXXXEGGEXXPGG 576
           GG  G P  G        P G  +G   GGP    +GG   PGG
Sbjct: 32  GGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPGGPGG 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,650,446
Number of Sequences: 53049
Number of extensions: 469733
Number of successful extensions: 1160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)