Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_N01
(906 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase (ubi... 104 4e-22
BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase (ubi... 104 4e-22
AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase (ubi... 104 4e-22
AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone oxidore... 104 4e-22
AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone oxidore... 104 4e-22
AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase (ubi... 103 1e-21
CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein. 102 2e-21
AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase (ubi... 100 1e-20
Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase (ubiqu... 46 2e-04
AB052622-1|BAB86306.1| 1250|Homo sapiens hDDM36 protein. 31 4.3
AF170084-1|AAF15317.1| 967|Homo sapiens metalloproteinase with ... 31 7.6
>BC019276-1|AAH19276.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 104 bits (250), Expect = 4e-22
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>BC000466-1|AAH00466.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 104 bits (250), Expect = 4e-22
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AL133352-3|CAH73563.1| 186|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 186
Score = 104 bits (250), Expect = 4e-22
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AF115968-1|AAP97239.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 104 bits (250), Expect = 4e-22
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AF044958-1|AAD05422.1| 186|Homo sapiens NADH:ubiquinone
oxidoreductase ASHI subunit protein.
Length = 186
Score = 104 bits (250), Expect = 4e-22
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AL133352-2|CAH73562.1| 155|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 155
Score = 103 bits (246), Expect = 1e-21
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +2
Query: 173 PGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKDPHYPYDNPEL 349
PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +DP Y +D P L
Sbjct: 7 PGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERDPWYSWDQPGL 66
Query: 350 KRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVFL----EDYKI 517
+ N+ EP+H +++ +R D S W L GF M+F+ + Y +
Sbjct: 67 RLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIFMCWVGDVYPV 121
Query: 518 GRPVTAKQIP 547
+PV KQ P
Sbjct: 122 YQPVGPKQYP 131
>CR533490-1|CAG38521.1| 186|Homo sapiens NDUFB8 protein.
Length = 186
Score = 102 bits (244), Expect = 2e-21
Identities = 54/140 (38%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+ P KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRIPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L----EDYKIGRPVTAKQIP 547
+ + Y + +PV KQ P
Sbjct: 143 MCWVGDVYPVYQPVGPKQYP 162
>AL133352-4|CAH73564.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8, 19kDa protein.
Length = 172
Score = 99.5 bits (237), Expect = 1e-20
Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +2
Query: 143 TRHHWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED-MGYGDYPKLPDIGEDSKD 319
T H PGPYP+TP KKY M V +Y PYP+D MGYGDYPKLPD + +D
Sbjct: 28 TASHMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPKLPDRSQHERD 87
Query: 320 PHYPYDNPELKRNFNEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVF 499
P Y +D P L+ N+ EP+H +++ +R D S W L GF M+F
Sbjct: 88 PWYSWDQPGLRLNWGEPMHWHLDMYNRNRVDTS-----PTPVSWHVMCMQLFGFLAFMIF 142
Query: 500 L 502
+
Sbjct: 143 M 143
>Y18944-1|CAB46274.1| 43|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 8 protein.
Length = 43
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 152 HWNYQYQPGPYPKTPXXXXXXXKKYGMTVXEYTPYPED 265
H PGPYP+TP KKY M V +Y PYP+D
Sbjct: 3 HMTKDMFPGPYPRTPEERAAAAKKYNMRVEDYEPYPDD 40
>AB052622-1|BAB86306.1| 1250|Homo sapiens hDDM36 protein.
Length = 1250
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 52 AIVKLSSLLEXRSVQQLSIHKQNGSSVLQCH*ASLELPVPTW 177
A+VKL++L + + ++NG++ +CH L P+ TW
Sbjct: 135 AVVKLATLADFSLHPESQTVEENGTARFECHIEGLPAPIITW 176
>AF170084-1|AAF15317.1| 967|Homo sapiens metalloproteinase with
thrombospondin type 1 motifs ADAMTS1 protein.
Length = 967
Score = 30.7 bits (66), Expect = 7.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -2
Query: 329 DNEDPWSP-HQYQVAS--DNHHSPYLQDREYTPLQ 234
D+ PWSP Y + S DN H L D+ + P+Q
Sbjct: 438 DHSQPWSPCSAYMITSFLDNGHGECLMDKPHNPIQ 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,965,356
Number of Sequences: 237096
Number of extensions: 1778915
Number of successful extensions: 3362
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3349
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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