Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M23
         (927 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O18405 Cluster: Surfeit locus protein 4 homolog; n=21; ...   116   9e-25
UniRef50_Q18864 Cluster: Surfeit locus protein 4 homolog; n=2; C...    87   8e-16
UniRef50_Q5KAQ3 Cluster: ER to Golgi transport-related protein, ...    80   9e-14
UniRef50_UPI0000F2C9FF Cluster: PREDICTED: similar to Surf4 prot...    76   1e-12
UniRef50_O74559 Cluster: Surfeit locus protein 4 homolog; n=1; S...    70   7e-11
UniRef50_Q6C368 Cluster: Yarrowia lipolytica chromosome F of str...    69   1e-10
UniRef50_A3GGM7 Cluster: Predicted protein; n=6; Saccharomycetal...    61   5e-08
UniRef50_O45731 Cluster: Uncharacterized protein T02E1.7; n=2; C...    58   4e-07
UniRef50_P53337 Cluster: ER-derived vesicles protein ERV29; n=7;...    54   5e-06
UniRef50_A6GPN8 Cluster: DoxX; n=1; Limnobacter sp. MED105|Rep: ...    37   0.64 
UniRef50_A6LG23 Cluster: Glycosyltransferase family 2; n=2; Para...    35   3.4  
UniRef50_Q39LK3 Cluster: DoxX; n=6; Burkholderia cepacia complex...    34   5.9  
UniRef50_Q129H8 Cluster: DoxX; n=3; Comamonadaceae|Rep: DoxX - P...    33   7.8  

>UniRef50_O18405 Cluster: Surfeit locus protein 4 homolog; n=21;
           Eumetazoa|Rep: Surfeit locus protein 4 homolog -
           Drosophila melanogaster (Fruit fly)
          Length = 270

 Score =  116 bits (279), Expect = 9e-25
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = +3

Query: 105 YHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           YHNAWW +PSYKPLRDFLKYDFFQTLSVIGGLLMIV LGPGGVSMDEHKKKW
Sbjct: 219 YHNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVSMDEHKKKW 270


>UniRef50_Q18864 Cluster: Surfeit locus protein 4 homolog; n=2;
           Caenorhabditis|Rep: Surfeit locus protein 4 homolog -
           Caenorhabditis elegans
          Length = 277

 Score = 86.6 bits (205), Expect = 8e-16
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           NAWW +PS +  RDF+KYDFFQT+SVIGGLL+++  GPGGVS+D++KK+W
Sbjct: 228 NAWWTIPSDRFYRDFMKYDFFQTMSVIGGLLLVIAYGPGGVSVDDYKKRW 277


>UniRef50_Q5KAQ3 Cluster: ER to Golgi transport-related protein,
           putative; n=18; Dikarya|Rep: ER to Golgi
           transport-related protein, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 315

 Score = 79.8 bits (188), Expect = 9e-14
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKK 254
           N WW+V +  P RDFLKYDFFQTLS++GGLL++V +GPGG SMDE KK
Sbjct: 266 NNWWSVHAAHPQRDFLKYDFFQTLSIVGGLLLLVNIGPGGFSMDEKKK 313


>UniRef50_UPI0000F2C9FF Cluster: PREDICTED: similar to Surf4
           protein; n=1; Monodelphis domestica|Rep: PREDICTED:
           similar to Surf4 protein - Monodelphis domestica
          Length = 298

 Score = 76.2 bits (179), Expect = 1e-12
 Identities = 29/50 (58%), Positives = 40/50 (80%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           N +W +P+ +PL DF+KYDFF T SVIGG L++V LGPG +S+D+ KK+W
Sbjct: 249 NPFWIIPANRPLHDFMKYDFFHTTSVIGGFLLVVALGPGEISVDKQKKQW 298


>UniRef50_O74559 Cluster: Surfeit locus protein 4 homolog; n=1;
           Schizosaccharomyces pombe|Rep: Surfeit locus protein 4
           homolog - Schizosaccharomyces pombe (Fission yeast)
          Length = 302

 Score = 70.1 bits (164), Expect = 7e-11
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKK 254
           N++W+VP   P RDF +YDFFQTLS++GGLL +V  GPG  S+DE KK
Sbjct: 253 NSFWSVPRESPYRDFYRYDFFQTLSIVGGLLYLVNTGPGKFSVDEKKK 300


>UniRef50_Q6C368 Cluster: Yarrowia lipolytica chromosome F of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome F of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 322

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 28/48 (58%), Positives = 39/48 (81%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKK 254
           N++WA P+  P+RD+LKY+ FQTLS+IGGLL++V  G G +S+DE KK
Sbjct: 273 NSYWAFPASSPVRDYLKYEHFQTLSIIGGLLLVVNTGAGKISIDEKKK 320


>UniRef50_A3GGM7 Cluster: Predicted protein; n=6;
           Saccharomycetales|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 306

 Score = 60.9 bits (141), Expect = 5e-08
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +3

Query: 105 YHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKK 254
           + N +W    +   RDFLKY+FFQTLS++GGLL+IV  G G  S+DE KK
Sbjct: 255 FANQFWLYGRHDASRDFLKYEFFQTLSIVGGLLIIVNAGAGEFSIDEKKK 304


>UniRef50_O45731 Cluster: Uncharacterized protein T02E1.7; n=2;
           Caenorhabditis|Rep: Uncharacterized protein T02E1.7 -
           Caenorhabditis elegans
          Length = 269

 Score = 57.6 bits (133), Expect = 4e-07
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 156 LKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           ++YDFFQTLS IGGLL++++ GPG  S DE KKKW
Sbjct: 235 IRYDFFQTLSAIGGLLLLIHTGPGEFSFDELKKKW 269


>UniRef50_P53337 Cluster: ER-derived vesicles protein ERV29; n=7;
           Saccharomycetales|Rep: ER-derived vesicles protein ERV29
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 310

 Score = 54.0 bits (124), Expect = 5e-06
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKK 254
           N +W   + K  RDFLKY+F+Q LS+IGGLL++   G G +S+DE KK
Sbjct: 263 NNYWFYNNTK--RDFLKYEFYQNLSIIGGLLLVTNTGAGELSVDEKKK 308


>UniRef50_A6GPN8 Cluster: DoxX; n=1; Limnobacter sp. MED105|Rep:
           DoxX - Limnobacter sp. MED105
          Length = 150

 Score = 37.1 bits (82), Expect = 0.64
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +3

Query: 105 YHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHK 251
           +HN +WA+P+ +     L   F + +SV GGLLMIV LG G + +++ K
Sbjct: 105 FHN-YWAMPAEQAYVQQLM--FMKNISVAGGLLMIVALGGGALGLNKGK 150


>UniRef50_A6LG23 Cluster: Glycosyltransferase family 2; n=2;
           Parabacteroides distasonis ATCC 8503|Rep:
           Glycosyltransferase family 2 - Parabacteroides
           distasonis (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 459

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -1

Query: 591 LSSPFTINKG----KDSFVSVSNTGTF*KYWFFSIIRLYSK*YKSMPNRKE 451
           L S F + +G     D FVS   +     +W+ +I+RLYSK +  +PN K+
Sbjct: 233 LKSLFQVTEGLIKFSDQFVSSKTSVDLRSWWYVNILRLYSKAFTLLPNIKD 283


>UniRef50_Q39LK3 Cluster: DoxX; n=6; Burkholderia cepacia
           complex|Rep: DoxX - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 137

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +3

Query: 117 WWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMD 242
           +WA+   +     +  +F++ +S+IGGLL++   GPG  S+D
Sbjct: 96  YWALQGMEQYMAMI--NFYKNVSIIGGLLLLALTGPGRYSLD 135


>UniRef50_Q129H8 Cluster: DoxX; n=3; Comamonadaceae|Rep: DoxX -
           Polaromonas sp. (strain JS666 / ATCC BAA-500)
          Length = 136

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 117 WWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMD 242
           +WAVP+ + +    +  FF+ ++V+GGLL +   G G  S+D
Sbjct: 92  YWAVPAEQVMMQ--QQAFFKNIAVVGGLLTVAAWGAGAWSLD 131


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,506,583
Number of Sequences: 1657284
Number of extensions: 15085401
Number of successful extensions: 27768
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27754
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)