Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M23
         (927 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.36 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   3.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -2

Query: 194 SYH*QCLEEVIFEEVS---ERFVGWHRPPRVMVQIENC--QYED 78
           SYH  C E ++F+ +S   E  +G    P  ++Q+ N   QYED
Sbjct: 583 SYHLSCAENMMFDPMSGKCEYSLGEKCRPGQIIQVANSLRQYED 626


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 331 VLKCMNGFMLHHFLCSPSALT*FYHFFLCSSILT 230
           V KC N   +++F C          F LCS   T
Sbjct: 47  VFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFT 80


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 420 IEGMFLNNLEPVRPATKPKS 361
           +EG  +++LEP R   KP+S
Sbjct: 7   VEGAMVHHLEPHRMQIKPQS 26


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 420 IEGMFLNNLEPVRPATKPKS 361
           +EG  +++LEP R   KP+S
Sbjct: 7   VEGAMVHHLEPHRMQIKPQS 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,328
Number of Sequences: 336
Number of extensions: 4428
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)