Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M23
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0605 - 24290777-24290830,24290914-24291075,24291494-242916...    30   3.0  
05_02_0148 - 7085892-7086011,7086681-7087004,7088258-7088419,708...    29   5.2  

>02_04_0605 -
           24290777-24290830,24290914-24291075,24291494-24291694,
           24291777-24291961,24292117-24292246
          Length = 243

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 129 PSYKPLRDFLKYDFFQTLSVIG 194
           PSY PL + +K+ FF  LS++G
Sbjct: 70  PSYLPLPELVKFVFFANLSIVG 91


>05_02_0148 -
           7085892-7086011,7086681-7087004,7088258-7088419,
           7088866-7089066,7089148-7089332,7089459-7089588
          Length = 373

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 129 PSYKPLRDFLKYDFFQTLSVIG 194
           PSY P+ + +K+ FF  LS++G
Sbjct: 70  PSYLPVPELIKFVFFANLSIVG 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,099,095
Number of Sequences: 37544
Number of extensions: 393209
Number of successful extensions: 741
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)