Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M23
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14949-1|CAA75173.1|  277|Caenorhabditis elegans SURF-4 protein ...    87   2e-17
U58728-5|AAB00591.1|  277|Caenorhabditis elegans Surfeit homolog...    87   2e-17
Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical pr...    58   1e-08
U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Y14949-1|CAA75173.1|  277|Caenorhabditis elegans SURF-4 protein
           protein.
          Length = 277

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           NAWW +PS +  RDF+KYDFFQT+SVIGGLL+++  GPGGVS+D++KK+W
Sbjct: 228 NAWWTIPSDRFYRDFMKYDFFQTMSVIGGLLLVIAYGPGGVSVDDYKKRW 277


>U58728-5|AAB00591.1|  277|Caenorhabditis elegans Surfeit homolog
           protein 4 protein.
          Length = 277

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = +3

Query: 111 NAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           NAWW +PS +  RDF+KYDFFQT+SVIGGLL+++  GPGGVS+D++KK+W
Sbjct: 228 NAWWTIPSDRFYRDFMKYDFFQTMSVIGGLLLVIAYGPGGVSVDDYKKRW 277


>Z81581-7|CAB04659.1|  269|Caenorhabditis elegans Hypothetical
           protein T02E1.7 protein.
          Length = 269

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 156 LKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW 260
           ++YDFFQTLS IGGLL++++ GPG  S DE KKKW
Sbjct: 235 IRYDFFQTLSAIGGLLLLIHTGPGEFSFDELKKKW 269


>U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical
           protein F21C10.12 protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 326 EMYEWIYVAPFFM*SVCVDLILPFLLVFV 240
           E + W Y++ F + SV  D +LPF+++F+
Sbjct: 176 EEHWWYYISYFIIISVIFDYLLPFVIMFI 204


>AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical
           protein C08G5.6 protein.
          Length = 306

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 233 QYGRTQEEMVELSQRRRTT*KMVQHKSIHTFQYSCLLTSGVLFDFGLVAG 382
           Q+   Q+EM  +S     +  +  H  I  F    L+ SGV+F F L++G
Sbjct: 36  QFFPLQDEMAWISAPLLISANVFLHACIRQFSIESLVFSGVIFSFFLLSG 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,470,681
Number of Sequences: 27780
Number of extensions: 380860
Number of successful extensions: 693
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)