Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M15
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0127 - 27872803-27873238,27873842-27874059                       28   9.1  
01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780...    28   9.1  
01_05_0328 + 21035231-21036931                                         28   9.1  

>05_07_0127 - 27872803-27873238,27873842-27874059
          Length = 217

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/69 (24%), Positives = 33/69 (47%)
 Frame = +2

Query: 20  LTIGNSLRFKLLESISPLDIMALTQQILLVIIGVAFVYSAPLTSGLIPNILTSPLHVLTS 199
           + +GN    + L ++S  D  A  ++     +  + + S  + +     +LT   HV++ 
Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFT-EVLTQIYHVVSK 179

Query: 200 KPLDILDNP 226
           K LDI D+P
Sbjct: 180 KALDIGDDP 188


>01_06_0157 +
           27075179-27075529,27075849-27076043,27077705-27078036,
           27078157-27078577
          Length = 432

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 193 QYVQWA---GQNIRNEPRSQWSRVNKGYADNHQQYLLCERHDVQG 68
           QYV WA   GQ I ++     + V KG+  NH + +L  ++ + G
Sbjct: 149 QYVNWARAQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITG 193


>01_05_0328 + 21035231-21036931
          Length = 566

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 65  SPLDIMALTQQILLVIIGVAFVYSAPL 145
           +P+ +  LT Q LLV  G AF+Y+  L
Sbjct: 438 TPISVFLLTPQFLLVGAGEAFIYTGQL 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,614,093
Number of Sequences: 37544
Number of extensions: 255507
Number of successful extensions: 477
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)