Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_M14
(916 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 210 5e-53
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 208 1e-52
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 190 6e-47
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 158 2e-37
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 156 9e-37
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 151 2e-35
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 143 5e-33
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 138 2e-31
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 137 4e-31
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 134 3e-30
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 132 2e-29
UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 131 3e-29
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 130 6e-29
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 128 3e-28
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 126 1e-27
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 125 1e-27
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 116 8e-25
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 115 1e-24
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 114 3e-24
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 110 4e-23
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 109 1e-22
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 109 1e-22
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 107 5e-22
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 107 5e-22
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 98 3e-19
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 95 2e-18
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 79 1e-13
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 67 7e-10
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 66 1e-09
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 66 1e-09
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 64 5e-09
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 63 1e-08
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 62 2e-08
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 59 2e-07
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 59 2e-07
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 58 2e-07
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 58 2e-07
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 58 2e-07
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 58 3e-07
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 56 2e-06
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 56 2e-06
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 55 2e-06
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 54 5e-06
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 54 5e-06
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 53 9e-06
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 53 9e-06
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 52 2e-05
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 52 2e-05
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 51 4e-05
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 51 4e-05
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 51 5e-05
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 51 5e-05
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 50 8e-05
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 50 8e-05
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 50 1e-04
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 48 3e-04
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 48 3e-04
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 47 6e-04
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 47 8e-04
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 47 8e-04
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 46 0.001
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 44 0.004
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 44 0.005
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 43 0.010
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 42 0.017
UniRef50_Q55DY7 Cluster: Proteasome subunit beta type 2; n=1; Di... 42 0.029
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 40 0.089
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 40 0.12
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 38 0.36
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 38 0.47
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 36 1.1
UniRef50_A0CW62 Cluster: Proteasome subunit beta type; n=3; Olig... 36 1.1
UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome... 36 1.4
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 36 1.4
UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;... 36 1.9
UniRef50_Q8MSZ2 Cluster: GM14375p; n=3; Drosophila melanogaster|... 35 3.3
UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;... 35 3.3
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 34 4.4
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 34 4.4
UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae ba... 34 5.8
UniRef50_Q7QXH1 Cluster: Proteasome subunit alpha type; n=2; Gia... 34 5.8
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 34 5.8
UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 5.8
UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7; Tryp... 34 5.8
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 34 5.8
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 33 7.7
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 33 7.7
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 210 bits (512), Expect = 5e-53
Identities = 92/149 (61%), Positives = 122/149 (81%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
T++++AR++MY+H +NK+MTT A+A MLST+LY +RFFPYYV N++ GLD +GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DP+G R +F+AGGSA+A LQPLLDNQ+G KNMQNV PL ++A+ L+KDVFISAAE
Sbjct: 153 DPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAE 212
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRKD 533
RD+YTGD++ I I+T GI+EE LRKD
Sbjct: 213 RDVYTGDALRICIVTKEGIREETVSLRKD 241
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 208 bits (509), Expect = 1e-52
Identities = 93/149 (62%), Positives = 123/149 (82%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
T++++AR++MY+H +NKSMT+ A+A MLST+LY +RFFPYYV N++ GLD +G+G VYS+
Sbjct: 90 TKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSF 149
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DP+G R ++AGGSA+A LQPLLDNQIG KNM+NV + PL +EKA+ L+KDVFISAAE
Sbjct: 150 DPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAE 209
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRKD 533
RD+YTGD++ I IIT GI+EE LRKD
Sbjct: 210 RDVYTGDALKICIITKEGIREEIVPLRKD 238
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 190 bits (462), Expect = 6e-47
Identities = 89/151 (58%), Positives = 114/151 (75%), Gaps = 2/151 (1%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
T ++ RMQ YEH H ++MTT AVAQMLS +Y +RFFPYYVSN+LAG+D++GKG VYSY
Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNM--QNVTEAPLPREKALALLKDVFISA 440
DPIGHC + +RAGG+A LQP+LDNQIG KNM ++ + L +E+A+++ D FISA
Sbjct: 145 DPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISA 204
Query: 441 AERDIYTGDSIYILIITASGIQEEKFELRKD 533
AERDIYTGDS+ I IIT GI+ LR+D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 158 bits (384), Expect = 2e-37
Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++YD +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKN--MQNVTEA--PLPREKALALLKDVFISAA 443
G R + A G+ +A + P+LDNQ+ + + +A PL +A+ L+KDVF SA
Sbjct: 132 GSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASAT 191
Query: 444 ERDIYTGDSIYILIITASGIQEEKFELRKD 533
ERDIYTGD + I++I +G + E +LRKD
Sbjct: 192 ERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 156 bits (378), Expect = 9e-37
Identities = 74/152 (48%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 72 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 131
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQI----GLKNMQNVTEAPLPREKALALLKDVFIS 437
+G R + A GS + + P LDNQ+ L + + PL +A+ L+K VF S
Sbjct: 132 AVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFAS 191
Query: 438 AAERDIYTGDSIYILIITASGIQEEKFELRKD 533
A ERDIYTGD + I+I+ A GI+ E +LRKD
Sbjct: 192 ATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 151 bits (367), Expect = 2e-35
Identities = 68/146 (46%), Positives = 99/146 (67%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
++ +++Y +++NK + + A+ + MLY KRFFPYYV ++AGLD +GKG VYSYDP+
Sbjct: 93 IKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDPV 152
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDI 455
G R RAGGSAA+ + P LD+Q+ KN Q PL E+AL ++KD F SA ER I
Sbjct: 153 GSYEREFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSSATERHI 212
Query: 456 YTGDSIYILIITASGIQEEKFELRKD 533
+ GD + ILI+T G+++E F L++D
Sbjct: 213 HVGDGLEILIVTKEGVRKEFFPLKRD 238
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 143 bits (347), Expect = 5e-33
Identities = 74/159 (46%), Positives = 97/159 (61%), Gaps = 13/159 (8%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV +LAG+D DGKG +YSYDP+
Sbjct: 108 LDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPV 167
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNM-------------QNVTEAPLPREKALAL 416
G R RA G+AA+ + P LDNQ+ KN Q P PR+ AL L
Sbjct: 168 GSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMDKQPRPSEPPPRDVALQL 227
Query: 417 LKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 533
+ D F SA ER I GD + +++IT GIQE L+KD
Sbjct: 228 VNDAFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 138 bits (334), Expect = 2e-31
Identities = 67/149 (44%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Frame = +3
Query: 90 RLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
++L+ R+Q Y++ + K +T A+A++ STMLY +RFFPYY N++ G+D G G YSY
Sbjct: 110 QMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSY 169
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DP+G + GSA++ ++PLLD + ++M A L E+AL +LK+ F AAE
Sbjct: 170 DPVGSTEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAE 229
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRKD 533
RDI+TGD++ IITA G+ E FELRKD
Sbjct: 230 RDIFTGDTVCFHIITADGVGTEMFELRKD 258
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 137 bits (331), Expect = 4e-31
Identities = 65/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L++ ++ +E EH K M+TPA+AQ LS LYYKRFFPYY N++AG+D G+G +++YD +
Sbjct: 90 LKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAV 149
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVT-EAPLPREKALALLKDVFISAAERD 452
G R + + GS + PLLDNQ+ N Q V + E+ ++ +KD SA ERD
Sbjct: 150 GSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSAGERD 209
Query: 453 IYTGDSIYILIITASGIQEEKFELRKD 533
IYTGD I+++ +G+ EKFEL+ D
Sbjct: 210 IYTGDFADIVVVDKNGVHWEKFELKLD 236
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 134 bits (324), Expect = 3e-30
Identities = 66/141 (46%), Positives = 89/141 (63%), Gaps = 6/141 (4%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
++ R++ YEH HNK+M ++A+M+ TMLY KRFFPYYV N+L G++ DG G VYS+DP+
Sbjct: 90 VKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPV 149
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQ-NVTEAP-----LPREKALALLKDVFIS 437
G R RA G+A + +QP LDNQ+ KN Q AP LP L+L+ D F S
Sbjct: 150 GSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLSTVLSLVVDSFTS 209
Query: 438 AAERDIYTGDSIYILIITASG 500
A ER I GD + I ++ A G
Sbjct: 210 ATERHIEVGDGMEIYVVMAKG 230
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 132 bits (318), Expect = 2e-29
Identities = 65/151 (43%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Frame = +3
Query: 108 MQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 284
++ Y +HN K ++ + A+ + +LY KRFFPYYV ++AGLD DGKG VYS+DP+G
Sbjct: 91 VKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSY 150
Query: 285 ARHNFRAGGSAAAQLQPLLDNQIGLKNM-----QNVTEAPLPR---EKALALLKDVFISA 440
R RAGG+AA+ + P LDNQ+ KN + PL E+ + L++D F SA
Sbjct: 151 EREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSA 210
Query: 441 AERDIYTGDSIYILIITASGIQEEKFELRKD 533
ER I GD + ILI+T G+++E +EL++D
Sbjct: 211 TERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S
proteasome beta 6 subunit; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 20S proteasome
beta 6 subunit - Strongylocentrotus purpuratus
Length = 165
Score = 131 bits (316), Expect = 3e-29
Identities = 59/97 (60%), Positives = 76/97 (78%)
Frame = +3
Query: 243 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLK 422
GKGCVYS+DP+G R +RA GS++A LQPLLDNQIG KN + + P+P +KA+AL+K
Sbjct: 69 GKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVK 128
Query: 423 DVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 533
DVFISAAERDIYTGD I + ++T G +EE+F LR+D
Sbjct: 129 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 165
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 130 bits (313), Expect = 6e-29
Identities = 63/148 (42%), Positives = 94/148 (63%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
+ L A++++YE EHNK+ + A+AQ+LS +LY KRFFPYY +L+GLD GKG VY YD
Sbjct: 101 KTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYD 160
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
+G +H F A GS + + +LDNQI N + + + + ++KD SA+ER
Sbjct: 161 AVGSFDQHKFVALGSGGSLITSILDNQISGNNQTSFES--IDKVGIINIVKDSITSASER 218
Query: 450 DIYTGDSIYILIITASGIQEEKFELRKD 533
D++TGDS +++I +SGI LR+D
Sbjct: 219 DVHTGDSAEVIVIDSSGISVSSLRLRED 246
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 128 bits (308), Expect = 3e-28
Identities = 64/139 (46%), Positives = 88/139 (63%)
Frame = +3
Query: 117 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 296
Y + K + ++LS M+YY+R FP+Y S+++AG+DS+G+G VYSYD IG R
Sbjct: 121 YYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGRGAVYSYDVIGSTLRTR 180
Query: 297 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 476
+ + G+ A + P+LD I KN EA + RE A L++ F S AERDIYTGDS+
Sbjct: 181 YGSAGTGNAMICPILDEAILSKN-----EAEITREFAFELIQSAFRSCAERDIYTGDSVV 235
Query: 477 ILIITASGIQEEKFELRKD 533
+ I+A GIQE FELRKD
Sbjct: 236 AMCISADGIQERTFELRKD 254
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 126 bits (303), Expect = 1e-27
Identities = 65/150 (43%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++LQ+R+ Y ++ M+ A++LS LYY+RFFPYY +LAG+D GKG V+SYD
Sbjct: 109 KVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYD 168
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAP-LPREKALALLKDVFISAAE 446
PIG R + A G+A + P LD QIG + E P L ++A++L+KD F AAE
Sbjct: 169 PIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLMKDSFRGAAE 228
Query: 447 RDIYTGDSIYILIITASGIQEEKF-ELRKD 533
R+I TGD I+++I A KF LR+D
Sbjct: 229 REISTGDKIHLVIAEAGKPVVVKFLPLRED 258
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 125 bits (302), Expect = 1e-27
Identities = 67/148 (45%), Positives = 90/148 (60%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
+ LQ R+Q+YE ++ +T VA +LS LY +RFFPYY N+LAGLD + G VY YD
Sbjct: 93 KFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYD 152
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
IG + + GS + +LDNQ+ N N T P RE+ L ++ D F AAER
Sbjct: 153 AIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKINKT-IPQTREEILDIILDCFSCAAER 211
Query: 450 DIYTGDSIYILIITASGIQEEKFELRKD 533
DI+TGD++ ILIITA+G + LRKD
Sbjct: 212 DIHTGDNVEILIITAAGTERIVKPLRKD 239
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 116 bits (279), Expect = 8e-25
Identities = 57/146 (39%), Positives = 90/146 (61%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L A + MY+++H K++ A AQ +STMLY KRFFPY + ++AG+D+DG+G +Y YDP
Sbjct: 77 LDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGAIYYYDPA 136
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDI 455
G + + A G A++ + P LD+Q +Q PL + A L++D + A ER I
Sbjct: 137 GCIEKRSHCAAGEASSLMLPFLDSQ--APRLQ-----PLSLQTAQQLVRDAYTGATERHI 189
Query: 456 YTGDSIYILIITASGIQEEKFELRKD 533
GD + +L++T G+ E+ +L+KD
Sbjct: 190 EVGDHLQMLVVTREGVSEQLVDLKKD 215
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 115 bits (277), Expect = 1e-24
Identities = 57/149 (38%), Positives = 87/149 (58%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
+++LQ ++Q++ EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSY
Sbjct: 120 SKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSY 179
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
D IG + GS ++ + P+LDN++ KN Q + + +KD SA E
Sbjct: 180 DAIGSYYQSTHACTGSGSSLILPILDNRVEQKN-QLIKNMDFNLRDDINFVKDAMTSATE 238
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRKD 533
RDIYTGD I II GI +L++D
Sbjct: 239 RDIYTGDKAEIYIIDNLGINTTLLDLKQD 267
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 114 bits (275), Expect = 3e-24
Identities = 58/149 (38%), Positives = 94/149 (63%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
T ++A ++ Y++E+ K M+T +VAQ+LS LY RFFPYY ++LAG++S GK Y+Y
Sbjct: 84 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 143
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
D +G + GS PLLD+ +++ TE PL ++A+ + +DV SA E
Sbjct: 144 DAVGSFEERKYSCSGSGEELAYPLLDSL-----LKDRTE-PLGEQEAINIARDVMTSACE 197
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRKD 533
RDI+TGD++ I+I+ ++GI++E + D
Sbjct: 198 RDIHTGDNVEIVILNSNGIRKEVHFMASD 226
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 110 bits (265), Expect = 4e-23
Identities = 57/147 (38%), Positives = 83/147 (56%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 272
LL+ +++++ EH +A++L +LY +RFFPYY N+LAG+ +D KG +Y+YD
Sbjct: 96 LLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDA 155
Query: 273 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERD 452
IG GS +A + P+LDN++ KN Q + L +KD SA ERD
Sbjct: 156 IGSYCEATHSCVGSGSALILPILDNRMEQKN-QLIKNLNFNLRDDLDFVKDAITSATERD 214
Query: 453 IYTGDSIYILIITASGIQEEKFELRKD 533
IYTGDS I II G+ EL++D
Sbjct: 215 IYTGDSTEIYIIDQMGVNTTSLELKQD 241
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 109 bits (262), Expect = 1e-22
Identities = 55/147 (37%), Positives = 88/147 (59%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 272
+L+ ++++Y + HN+ T A+AQ+LST+LY +RFFPYY N+L G+D GKG V YD
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 273 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERD 452
+G+ + A G++++ + +LDN + N Q V E + L+K+ +SA ERD
Sbjct: 133 VGNYNYEKYTAQGTSSSLVISVLDNLLN-GNNQKVKPEVNSLEDLVNLVKNAMVSAVERD 191
Query: 453 IYTGDSIYILIITASGIQEEKFELRKD 533
I TGDS ++I ++ +LR D
Sbjct: 192 ICTGDSAELVICDGVVMEPVHMDLRID 218
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 109 bits (262), Expect = 1e-22
Identities = 49/136 (36%), Positives = 82/136 (60%)
Frame = +3
Query: 117 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 296
YE++H M+ +VA+ +S LY KRFFPYY++ ++ G++S+GKG +Y YDP+G +
Sbjct: 86 YENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLH 145
Query: 297 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 476
+ + GS ++ PLLD+ G + + + A +++D S ERDIYTGD++
Sbjct: 146 YDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRDAICSVTERDIYTGDALQ 205
Query: 477 ILIITASGIQEEKFEL 524
+ + T G +E+F L
Sbjct: 206 LCVFTKDGFAQEEFPL 221
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 107 bits (256), Expect = 5e-22
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
++ L AR+ MY++ + K A+A +LS LYYKRFFPYY N+LAG D G+G V +Y
Sbjct: 99 SKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINY 158
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPR-EKALALLKDVFISAA 443
D +G + GS A + P+ D + + + L E+ ++ + D F SA
Sbjct: 159 DAVGSGDFKKYAVLGSGAQLITPVFDQY--FEGYNKIKKEQLHTVEEFISFIVDCFESAT 216
Query: 444 ERDIYTGDSIYILIITASGIQE-EKFELRKD 533
ERDIYTGD + I+I+ E + F LRKD
Sbjct: 217 ERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 107 bits (256), Expect = 5e-22
Identities = 56/141 (39%), Positives = 82/141 (58%)
Frame = +3
Query: 111 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 290
++ ++E + S+ + A +LS +LY KRFFPYY VL+G + GK VYSYDPIG
Sbjct: 151 EIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFEK-GKPYVYSYDPIGSFGS 209
Query: 291 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDS 470
GS + +QPLLD+ I KN N E L +E + L+ F SAAERD+ T D+
Sbjct: 210 VTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNSAAERDVKTKDN 269
Query: 471 IYILIITASGIQEEKFELRKD 533
+ + ++ + + E F LR+D
Sbjct: 270 LEVCVMRENQVMRETFPLRRD 290
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 97.9 bits (233), Expect = 3e-19
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60
Query: 270 PIGHCARHNFRAGG 311
+G R + A G
Sbjct: 61 AVGSYERVGYGAQG 74
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 95.5 bits (227), Expect = 2e-18
Identities = 57/131 (43%), Positives = 76/131 (58%)
Frame = +3
Query: 141 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAA 320
M T A+A MLST+LYY+RFFPYY +N AG
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYT--------------------------YNILAGLDEE 34
Query: 321 AQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASG 500
+L P + + IG KN + + P+P +KA+AL+KDVFISAAERDIYTGD I + ++T G
Sbjct: 35 GEL-PTISSGIGGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDG 93
Query: 501 IQEEKFELRKD 533
+EE+F LR+D
Sbjct: 94 CKEERFPLRRD 104
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 79.4 bits (187), Expect = 1e-13
Identities = 50/146 (34%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R+++A M++YE + N S VA++LS +LY +R FPYY V+ GLD +G +YS D
Sbjct: 62 RIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSH-LYSLD 120
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALAL-LKDVFISAAE 446
PIG ++ A GS Q+ + +++ + + ++AL+L LK V+ +A +
Sbjct: 121 PIGAIIEDDYVALGSG---------TQLAISIVESNYKKDMSLDEALSLALKSVY-AAMK 170
Query: 447 RDIYTGDSIYILIITASGIQEEKFEL 524
RD +GD + +L+I SG E+ + L
Sbjct: 171 RDAASGDGVDVLVIGKSGTLEKTYPL 196
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 66.9 bits (156), Expect = 7e-10
Identities = 39/134 (29%), Positives = 77/134 (57%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
+++L+A ++ Y + ++ AVA++L+T+LY +++P+ ++ GL++DG +Y
Sbjct: 64 SKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVM 123
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DP+G ++ A GS A +L+N G +V +A ++ A+A ++ +A E
Sbjct: 124 DPLGSLIEDDYAAIGSGAPIAIGILEN--GYSKDMSVDDA---KKLAIAAVR----AAIE 174
Query: 447 RDIYTGDSIYILII 488
RD +GD I +L+I
Sbjct: 175 RDAMSGDGIDLLVI 188
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/137 (28%), Positives = 71/137 (51%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R+++ +M++ E K T VA+ LS++LY +FFP+ V ++ G+D G+ +Y D
Sbjct: 62 RIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLD 121
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P+G ++ A G+ A GL +++V + + E+A + ++ R
Sbjct: 122 PLGSIIEEDYVAAGTGAT-------TAFGL--LEHVYKRGMSLEEAKKAAVEALRASMAR 172
Query: 450 DIYTGDSIYILIITASG 500
D TGD I +L++ SG
Sbjct: 173 DAGTGDGIDVLVLPVSG 189
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 66.1 bits (154), Expect = 1e-09
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Frame = +3
Query: 60 LAGVTH*PCTRLLQARMQ--MYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGL 233
LAG+ T Q RM+ +Y + ++ + A A+M+S+ LY RF PY++S ++AG
Sbjct: 55 LAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGF 114
Query: 234 DSDGKGCVYSYDPIGHCARH--NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKA 407
++DGK + + D IG C NF+ G+A+ L L + + + + ++
Sbjct: 115 EADGKPYLGAMDTIG-CLDDCTNFQIAGTASDFLLGLCETHV---------KPDMSEDEI 164
Query: 408 LALLKDVFISAAERDIYTGDSIYILIITASG 500
L L++ + SA RD Y+G +++++ G
Sbjct: 165 LPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 64.1 bits (149), Expect = 5e-09
Identities = 36/135 (26%), Positives = 68/135 (50%)
Frame = +3
Query: 129 HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAG 308
+N + + + S++LY +RFFP+Y N+L G++ GK Y+YD IG ++
Sbjct: 107 NNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNYTYDAIGSFDCNHASTV 166
Query: 309 GSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILII 488
G+ + Q ++D I + + N + ++L+K +F + + + GD + + I+
Sbjct: 167 GNCQSSAQCIMD-YIEERKIPNDRNYKTILQ-VVSLIKIIFSTLCNKQVDMGDILQLFIV 224
Query: 489 TASGIQEEKFELRKD 533
+ GI E LR D
Sbjct: 225 SKKGILVENSILRLD 239
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 62.9 bits (146), Expect = 1e-08
Identities = 41/144 (28%), Positives = 69/144 (47%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
TR++ ++ YE K ++ A A++LS +LY + P+ + G+D G +Y
Sbjct: 60 TRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQ-LYVL 118
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DPIG N+ A GS A +I + +++ + + + A L+ ++ E
Sbjct: 119 DPIGSLIEDNYAAVGSGA---------RIAIGVLESEYDPNMSLDVATQLITKAIKASIE 169
Query: 447 RDIYTGDSIYILIITASGIQEEKF 518
RDI +GD I + II G E KF
Sbjct: 170 RDITSGDGIDLAIIDKKGNYENKF 193
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 62.1 bits (144), Expect = 2e-08
Identities = 40/146 (27%), Positives = 78/146 (53%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++L+ + YE E + +T ++A++LS +++ +RF P++ ++ G+D +G + D
Sbjct: 65 KILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV-MD 123
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P+G N+ A G+ A +LD G + V EA ++ A+ LK +A ER
Sbjct: 124 PLGSLIEDNYAALGTGAKLAVAVLDT--GYRPDITVEEA---KKLAVQALK----AAIER 174
Query: 450 DIYTGDSIYILIITASGIQEEKFELR 527
D +G I + I+ +G +EE+ ++
Sbjct: 175 DPVSGGGIDLAIVDKNGAREEEVRVQ 200
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L+ + MYE N+ M+ A ++ST LY KRF PYY V+AGLD DGK + S D I
Sbjct: 66 LRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLI 125
Query: 276 G 278
G
Sbjct: 126 G 126
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 58.8 bits (136), Expect = 2e-07
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R+L+A + Y+ + MTT A+A +LS +L ++FPY V ++ G + + + D
Sbjct: 63 RILEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLD 120
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P+G ++ A GS +L+ G + + +A +E A+ +K +A R
Sbjct: 121 PLGGLIFDDYTATGSGTPFAIAILEE--GYRKNLGIEKA---KELAIKAVK----AAGAR 171
Query: 450 DIYTGD-SIYILIITASGIQEE 512
D+YTG I ++ IT G++EE
Sbjct: 172 DVYTGSKKIQVVTITKDGMKEE 193
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 58.4 bits (135), Expect = 2e-07
Identities = 42/144 (29%), Positives = 70/144 (48%)
Frame = +3
Query: 117 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 296
YE + + M+ A AQ LS +L+ +F+PY V +L G D+ + +Y+ D G
Sbjct: 81 YEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYDTQPR--LYNIDWFGSVTEEK 138
Query: 297 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 476
+ A GS + ++++Q L E+A+ L K S+ RD +TG+ +
Sbjct: 139 YVATGSGSPTAIGVIEDQYSPN---------LSMEEAVELAKRAVASSIRRDTFTGNGVD 189
Query: 477 ILIITASGIQEEKFELRKD*FVTK 548
+++I +E FEL KD TK
Sbjct: 190 VVVIGKDFYREYSFEL-KDILKTK 212
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/140 (27%), Positives = 66/140 (47%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
RLL+A ++Y + K M+ A+A +L+ ML R PY ++ G D K +YS D
Sbjct: 67 RLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDE--KPRLYSVD 124
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
+G + A GS +LD++ L + + + + SA +R
Sbjct: 125 MMGGITEDKYVAAGSGMEFAYSVLDSEY---------REDLKVREGIKIAVEAINSAIKR 175
Query: 450 DIYTGDSIYILIITASGIQE 509
D+++GD I ++ IT G +E
Sbjct: 176 DVFSGDGIMVVTITEEGYRE 195
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R+++ +YE + T A+A + S +L R+FPY V ++ G+DS+GK +YS D
Sbjct: 68 RIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSID 126
Query: 270 PIGHCARH-NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
PIG + A GS + +L+++ + ++A+ L SA +
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRF---------TPEIGVDEAVELAVRAIYSAMK 177
Query: 447 RDIYTGDSIYILIIT 491
RD +GD I ++ IT
Sbjct: 178 RDSASGDGIDVVKIT 192
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 58.0 bits (134), Expect = 3e-07
Identities = 39/144 (27%), Positives = 73/144 (50%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
+ A ++ + E + + VA+M+S M+Y +R+FP ++ G+ K +Y+ DP+
Sbjct: 66 IAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPL 123
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDI 455
G + A G+ A +LD Q N+T +++A+ L K +A+ RD
Sbjct: 124 GSVLPDEYAAVGTGAEMALGVLDPQF----KPNMT-----KDEAIDLAKRAVRAASLRDS 174
Query: 456 YTGDSIYILIITASGIQEEKFELR 527
+GD + +L+IT G +E E++
Sbjct: 175 ASGDGVDVLVITKDGTEEFTEEIK 198
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 281
++ MY+ +K M+ ++ M+ +MLY +RF P++V +V+AGLD+D + +D +G
Sbjct: 86 KVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDLVGAP 145
Query: 282 CARHNFRAGGSAAAQL 329
C +F G+ + QL
Sbjct: 146 CTPTDFVVAGTCSEQL 161
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLY--YKRFFPYYVSNVLAGLDSDGKGCVYSY 266
L++A ++YE HN+ ++ A+A M+S +L+ K F PY V ++ G + D +Y+
Sbjct: 68 LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDP-ALYNL 126
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
DP G ++ A GS + +L+ + E + + A+ + SA E
Sbjct: 127 DPSGSIIEEDYTATGSGSPTAYGVLEAEY---------EEGMSLDDAIEVAVRAVKSALE 177
Query: 447 RDIYTGDSIYILIIT 491
RD TG+ + ++ IT
Sbjct: 178 RDTGTGEGVTVVTIT 192
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
T L++ + +Y + + A++ M +++LY KRF PY+V ++AGLD++ + Y
Sbjct: 64 TNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGY 123
Query: 267 DPIGHCA-RHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAA 443
D IG + F G+A DNQ+ ++ L ++ + ++ +S
Sbjct: 124 DLIGCLSVCSEFAISGTA--------DNQL-FGICESYYRPDLEPDELMEIVSQCMLSGI 174
Query: 444 ERDIYTGDSIYILIITASGIQEEKFELRKD 533
+RD ++G + ++T + + + R D
Sbjct: 175 DRDAFSGWGCKVYLLTPEKLVTKTLKSRMD 204
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 54.0 bits (124), Expect = 5e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 272
LQ R MYE N+++ + MLS +LY +RF PY+V V+AG+D + K V D
Sbjct: 67 LQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDL 126
Query: 273 IG-HCARHNFRAGGSAAAQL 329
IG C ++F G+ Q+
Sbjct: 127 IGCVCEANDFVVSGTCTEQM 146
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 54.0 bits (124), Expect = 5e-06
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG------LDSDGKG- 251
LL+ R+ +YE M A MLS++LY RF PY+V+ ++ G LD +GK
Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127
Query: 252 CVY-----SYDPIG-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALA 413
C + +YD IG C +F G + QL + ++ + +K+ ++
Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCES-LYIKDQD--------KDGLFE 178
Query: 414 LLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 533
+ +SA +RD +G + ++T I ++K + R D
Sbjct: 179 TISQCLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
+LL R++++ ++M V ++S++LY KRF PY+ V+AGLD D + ++D
Sbjct: 67 QLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLCAFD 126
Query: 270 PIGHCAR-HNFRAGGSAAAQL 329
IG ++ +F G+++ QL
Sbjct: 127 FIGAMSKAQDFVVSGTSSEQL 147
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 53.2 bits (122), Expect = 9e-06
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
RLL A ++Y+ +++ A A +LS +L+ R FP+ ++ G D ++S D
Sbjct: 63 RLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122
Query: 270 PIGHC-ARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
P+G F A GS + +L + G +V E+ + L + SA E
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVL--EAGYDRDMSV-------EEGIKLALNALKSAME 173
Query: 447 RDIYTGDSIYILIITASGI---QEEKFELRKD*FVTKKSNK 560
RD ++G+ I + +IT G+ ++E+ E D K K
Sbjct: 174 RDTFSGNGISLAVITKDGVKIFEDEEIEKILDSMKAKPKKK 214
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 52.4 bits (120), Expect = 2e-05
Identities = 35/119 (29%), Positives = 61/119 (51%)
Frame = +3
Query: 153 AVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 332
+VA+M+S M+Y +RFFP ++ G+ G+ +Y+ D +G + A G+ A
Sbjct: 81 SVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAVGTGAEMAL 138
Query: 333 PLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQE 509
+LD Q ++ + + A+ L SAA RD ++GD + IL + A+G +E
Sbjct: 139 GVLDPQF---------KSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDILALDANGARE 188
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 52.0 bits (119), Expect = 2e-05
Identities = 43/138 (31%), Positives = 67/138 (48%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R L+A +YE + M+ A++ M S +L FF V +L G+D DG G V+S D
Sbjct: 118 RSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFR--VVPILGGVDDDG-GHVFSLD 174
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P G + A GS +L+ + +++T A + A A+ SA+ER
Sbjct: 175 PAGSSMSDTYTAQGSGMPYALGVLEQEYS----EDLTMADAEQVAAHAVK-----SASER 225
Query: 450 DIYTGDSIYILIITASGI 503
D +G+ I+I IT G+
Sbjct: 226 DTASGNGIHITKITHDGL 243
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 51.2 bits (117), Expect = 4e-05
Identities = 37/142 (26%), Positives = 66/142 (46%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 272
+L+ +++YE + + VA +LS +L+ +FFPY V ++ G D+ + +Y+ D
Sbjct: 83 VLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDL 140
Query: 273 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERD 452
G + A GS + +L+ + L E+A+ + SA RD
Sbjct: 141 FGSITEDKYTATGSGSPIAYGVLEERY---------REDLSVEEAIKVATTAIRSAVLRD 191
Query: 453 IYTGDSIYILIITASGIQEEKF 518
+GD +++I G EEKF
Sbjct: 192 AASGDGADVVVIGPQG-YEEKF 212
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 51.2 bits (117), Expect = 4e-05
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 272
L+ R+ +YE + + + + M++ +LY KRF PYY V+AGLD K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 273 IG-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
IG +F G+ A Q+ + +++ E + + + ++A +R
Sbjct: 127 IGCPMVTDDFVVSGTCAEQMYGM---------CESLWEPNMDPDHLFETISQAMLNAVDR 177
Query: 450 DIYTGDSIYILIITASGIQEEKFELRKD 533
D +G + + II I + R D
Sbjct: 178 DAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 50.8 bits (116), Expect = 5e-05
Identities = 31/119 (26%), Positives = 57/119 (47%)
Frame = +3
Query: 177 MLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIG 356
MLY KRF PYY+S ++AG+D +G V SYD IG G+ + +L + D
Sbjct: 96 MLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIGSPEISQVGCVGTGSNELMGMCD---- 151
Query: 357 LKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 533
+ + + E+ + + ++A RD ++G + + ++T + + R+D
Sbjct: 152 -----SFYKEGMEPEELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 205
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 50.8 bits (116), Expect = 5e-05
Identities = 36/142 (25%), Positives = 65/142 (45%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L+A +YE K M+ A++ + +L F Y V +L G+D +G +YS D +
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEGSH-IYSIDAL 164
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDI 455
G + GS + +L+ + + V EA KA+ SA ERD+
Sbjct: 165 GGTTEEEYTVTGSGSQYALGVLEQE--YDDDVTVDEAKTMAAKAIQ-------SAVERDL 215
Query: 456 YTGDSIYILIITASGIQEEKFE 521
+G+ I + ++T G+ +++
Sbjct: 216 ASGNGINVAVVTDDGVDITRYK 237
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 50.0 bits (114), Expect = 8e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R ++ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK + D
Sbjct: 66 RKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMD 125
Query: 270 PIGHCAR-HNFRAGGSAAAQLQPLLD 344
IG A +F A G+A L + +
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICE 151
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 50.0 bits (114), Expect = 8e-05
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 281
R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D IG
Sbjct: 70 RHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIGAK 129
Query: 282 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYT 461
+F G+A+ L ++ NM+ E+ + S+ +RD +
Sbjct: 130 ELAKDFVVSGTASESLYGACESMY-KPNME--------PEELFETISQALQSSVDRDCLS 180
Query: 462 GDSIYILIITASGIQEEKFELRKD 533
G ++L++T + ++E + R D
Sbjct: 181 GWGGFVLLVTPTEVKECVIKGRMD 204
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 49.6 bits (113), Expect = 1e-04
Identities = 35/139 (25%), Positives = 71/139 (51%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++++A + +Y+ +N ++ A A + + +L R P YV +L G+D D K +YS D
Sbjct: 65 KIIEAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLD 120
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P G + + GS + +L+++ + + T+ L E A+ +K +A+ER
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLEDRY---HEEITTDEGL--EIAVRAIK----AASER 171
Query: 450 DIYTGDSIYILIITASGIQ 506
D ++G+ + +T G +
Sbjct: 172 DTFSGNGYLVAKVTKDGFE 190
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 48.0 bits (109), Expect = 3e-04
Identities = 36/148 (24%), Positives = 69/148 (46%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R L+ + YE + + + +A++LS +LY + P V+ G D G +Y D
Sbjct: 74 RALRMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQ-IYVLD 132
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
P+G + A GS +++ + + +V EA + A++ +++ A ER
Sbjct: 133 PVGSLIEDKYVALGSGGPIALGIIEKE--YREDIDVDEA---EKLAVSAIRE----AIER 183
Query: 450 DIYTGDSIYILIITASGIQEEKFELRKD 533
D +GD + +L IT G ++ R++
Sbjct: 184 DAVSGDGVDVLRITEEGYSLREYMFRRE 211
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 48.0 bits (109), Expect = 3e-04
Identities = 32/125 (25%), Positives = 60/125 (48%)
Frame = +3
Query: 156 VAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQP 335
+A L+ +L ++FPY V ++ G D + +++ D +G N+ A GS +
Sbjct: 93 IATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMG 150
Query: 336 LLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQEEK 515
+L+++ K + ++A L K SA +RD +TG + + I + G +E +
Sbjct: 151 VLEDEYNPK---------MTLDEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKGHEELE 201
Query: 516 FELRK 530
F L K
Sbjct: 202 FYLNK 206
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 47.2 bits (107), Expect = 6e-04
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 281
R +YE N+++ +++M+S + Y RF Y+ ++AGLD K + D IG
Sbjct: 70 RKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCV 129
Query: 282 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYT 461
A +F A G+ L + +N +NM+ P E A + + +S ERD +
Sbjct: 130 SAPRDFVAVGTGQEYLLGVCEN-FWRENMK-------PDELFEATAQSI-LSCLERDAAS 180
Query: 462 GDSIYILIITASGIQEEKFELRKD 533
G + IT + + R D
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 46.8 bits (106), Expect = 8e-04
Identities = 32/137 (23%), Positives = 61/137 (44%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R L + +++E + ++ A ++ML+ +LY R + V +++ G D G Y D
Sbjct: 95 RELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHIFYVED 154
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
H F G S + L+D++ +P+EKA+ L + A R
Sbjct: 155 GGVRIPGHLFSVG-SGSPYAVSLIDSEYDYN---------MPKEKAIELARRAIFHATHR 204
Query: 450 DIYTGDSIYILIITASG 500
D+ +G ++ ++ I G
Sbjct: 205 DVASGGNVNVIFIDKDG 221
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 46.8 bits (106), Expect = 8e-04
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYS 263
+++++A + ++++++K ++T A A + L Y R PY V ++AG+D DG ++
Sbjct: 59 SKMIKATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDGPK-LFW 117
Query: 264 YDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAA 443
D + C + + G L+ LLD + N+T RE+A+ALLK
Sbjct: 118 IDYLASCTQADTAVHGYGGFLLRGLLDKEY----KPNMT-----REEAIALLKKCRHEVQ 168
Query: 444 ERDIYTGDSIYILIITASGIQE 509
R + + + II G+ +
Sbjct: 169 NRFLISQSNFAAKIIDKDGVHD 190
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 46.0 bits (104), Expect = 0.001
Identities = 33/134 (24%), Positives = 65/134 (48%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R ++A +++Y + +M AVA +LS ML ++ PY V ++ G+D+ V+S D
Sbjct: 65 RYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSID 122
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
G + + GS + + +L++Q K + ++ + L+ +A +R
Sbjct: 123 AAGGSVEDIYASTGSGSPFVYGVLESQYSEK---------MTVDEGVDLVIRAISAAKQR 173
Query: 450 DIYTGDSIYILIIT 491
D +G I + +IT
Sbjct: 174 DSASGGMIDVAVIT 187
>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome beta subunit -
Pyrobaculum aerophilum
Length = 202
Score = 44.4 bits (100), Expect = 0.004
Identities = 30/132 (22%), Positives = 64/132 (48%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L R Y+ E+ + + A+ +S +L+Y R + Y V +++ G+D + +Y D +
Sbjct: 60 LTLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWL 119
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDI 455
G + + A GS + + L ++G + + +A + A+ +K +A D
Sbjct: 120 GTVTKEKYIATGSGSPYAKGAL--EVGYREDMTLEDAV---DLAIKAVK----AAIRNDP 170
Query: 456 YTGDSIYILIIT 491
+G+ I +++IT
Sbjct: 171 GSGEGIDVVVIT 182
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 44.0 bits (99), Expect = 0.005
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
++L+ +++ E ++M A +LS +LY RF+ + ++AG + + +YS D
Sbjct: 58 KILKTELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLD 117
Query: 270 PIGHCAR-HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
IG + ++ A GS I L ++ + A+ L + S+
Sbjct: 118 GIGAISEIKDYFAEGSGGV---------IALGTLEAEYNPDITVRDAIKLAEKALKSSIA 168
Query: 447 RDIYTGDSIYILIITASGIQEEKFELRK 530
RD+++G I I IT G+++ E +K
Sbjct: 169 RDVFSGYGIEIYTITKKGVEKLFLEAQK 196
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 43.2 bits (97), Expect = 0.010
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDPIG- 278
R +MY+ + + A A ++S+MLY RF P++V V+ +D G+ + + D IG
Sbjct: 70 RTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGA 129
Query: 279 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIY 458
C ++ G+ A L + + + L E+ + +SA +RD
Sbjct: 130 PCEPEDYVCAGTCAESLHGM---------CEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 459 TGDSIYILIITASGIQEEKFELRKD 533
+G I+T + + RKD
Sbjct: 181 SGYGAVAAIVTKDKLVTRLIKGRKD 205
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 42.3 bits (95), Expect = 0.017
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 93 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 272
+L+ + + + K M + ++ST+LY KRF PY + ++AG +GK + + D
Sbjct: 63 ILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDC 122
Query: 273 IGHCAR-HNFRAGGSAAAQLQPLL 341
IG + N+ G+ + PL+
Sbjct: 123 IGAISYISNYACIGNLCENIFPLI 146
>UniRef50_Q55DY7 Cluster: Proteasome subunit beta type 2; n=1;
Dictyostelium discoideum AX4|Rep: Proteasome subunit
beta type 2 - Dictyostelium discoideum AX4
Length = 198
Score = 41.5 bits (93), Expect = 0.029
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDS---DGKGC 254
T + +++Y ++ M+TPA A + L R PY ++ +LAG D DG
Sbjct: 57 TEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTS 116
Query: 255 VYSYDPIGHCARHNFRAGGSAAAQLQPLLD 344
+Y D +G + NF G A+ L LLD
Sbjct: 117 LYYMDYLGSLQKLNFGCHGYASYFLLGLLD 146
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 39.9 bits (89), Expect = 0.089
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 272
L+ ++ +YE + + + M++ LY K F PYY V+AGLD K S D
Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126
Query: 273 IGH-CARHNFRAGGSAAAQLQPLLDN 347
IG +F GS A Q+ + ++
Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCES 152
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 39.5 bits (88), Expect = 0.12
Identities = 32/137 (23%), Positives = 65/137 (47%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
RLL + ++YE + + ++ A +++L+ M+Y + + ++ G D G G +Y D
Sbjct: 125 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPG-LYYVD 183
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
G+ + A GS + ++D+ GL++ +V E+A L + A R
Sbjct: 184 SEGNRVCGDLFAVGSGSMYAYGVMDS--GLRHDLSV-------EEACELGRRAIYQATYR 234
Query: 450 DIYTGDSIYILIITASG 500
D Y+G + + + + G
Sbjct: 235 DAYSGGQVNLYHVHSEG 251
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 37.9 bits (84), Expect = 0.36
Identities = 39/144 (27%), Positives = 60/144 (41%)
Frame = +3
Query: 108 MQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCA 287
+ +Y NK +T +Q+ LY R S ++AG D + G VY+ G +
Sbjct: 86 IDVYTMTENKPVTIYRSSQIFRQFLYNYRE-QLSASVLVAGWDEELGGQVYAIPIGGFVS 144
Query: 288 RHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGD 467
R A GS + +Q LD+Q L E+ A++K A RD +G
Sbjct: 145 RQRSTASGSGSTFVQGFLDSQ---------WRPNLTLEECKAIVKQAVGLATFRDGSSGG 195
Query: 468 SIYILIITASGIQEEKFELRKD*F 539
+ + +I +G Q E F K F
Sbjct: 196 VVRLAVINKAGSQFELFRPDKPGF 219
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 37.5 bits (83), Expect = 0.47
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Frame = +3
Query: 108 MQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 284
+ ++ E + T A++ S ++Y Y+ V ++AG+D + +Y+ P G C
Sbjct: 88 LDVHSMELQRRPTVKTAAKLFSNLIYQYQDNLSAAV--IVAGIDDNEGPSIYACQPSGSC 145
Query: 285 ARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTG 464
+ GGS + + +D NM E A L+K A RD +G
Sbjct: 146 IKQQVAIGGSGSGFIFSYVDANF-RPNMD--------LESAKKLVKTALAHAMSRDGSSG 196
Query: 465 DSIYILIITASGIQEEKFE 521
I ++ IT + E F+
Sbjct: 197 GIIRLVNITKDNVTREFFD 215
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 36.3 bits (80), Expect = 1.1
Identities = 30/137 (21%), Positives = 59/137 (43%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R L + ++YE E+ + + + +++ + L+ + V +++G DS C+Y D
Sbjct: 139 RDLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCD 198
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
G GS + ++D + + +TE E+A+AL K A R
Sbjct: 199 SEGTRIGGYLYGAGSGSTFAFGIVDTEYDFE----MTE-----EQAIALGKKAIYHAVSR 249
Query: 450 DIYTGDSIYILIITASG 500
D +G + + +I G
Sbjct: 250 DAMSGGMLNVYVIRPGG 266
>UniRef50_A0CW62 Cluster: Proteasome subunit beta type; n=3;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Paramecium tetraurelia
Length = 194
Score = 36.3 bits (80), Expect = 1.1
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +3
Query: 201 PYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVT 380
P+ + +L G+DSDG +Y D +G + A G A L LLDNQ
Sbjct: 98 PHQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQY--------- 148
Query: 381 EAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQ 506
+ L +E+ + ++K R + + + I+T GI+
Sbjct: 149 KPNLTKEEGIEIIKKCIKELQTRFLIAQNKFIVKIVTKQGIE 190
>UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6; n=1; Apis
mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6 - Apis
mellifera
Length = 209
Score = 35.9 bits (79), Expect = 1.4
Identities = 27/98 (27%), Positives = 45/98 (45%)
Frame = +3
Query: 219 VLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPR 398
++AG DS G VYS G C R GGS + + +D+Q + + +
Sbjct: 108 LVAGWDSRKGGQVYSVPIGGMCVRQPISIGGSGSTYVYGYMDSQY---------KPNMSK 158
Query: 399 EKALALLKDVFISAAERDIYTGDSIYILIITASGIQEE 512
+ + L+++ A RD +G I I +IT GI+ +
Sbjct: 159 NECVKLVENTLALAMSRDGSSGGVIRIGVITNKGIERK 196
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 35.9 bits (79), Expect = 1.4
Identities = 32/141 (22%), Positives = 66/141 (46%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 266
+R ++ +Q +E E + +VA + + ++ Y+ ++AG+D +G+ V+
Sbjct: 107 SRYVRRIVQDHELETGEDTKVKSVASV-ARLISYQNKEHLLADMIIAGMDPNGEFKVFRI 165
Query: 267 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAE 446
G ++ GS + + +LD++ +E L K+ A +D+ A
Sbjct: 166 PLGGTLIEGSYAISGSGSGYIYSMLDSKYH-------SEMDLDECKSFA--RDLVSHAMF 216
Query: 447 RDIYTGDSIYILIITASGIQE 509
RD +G I I++I SG++E
Sbjct: 217 RDSSSGGIIRIIVINKSGVEE 237
>UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;
n=4; Thermoprotei|Rep: 20S proteasome, alpha and beta
subunit - Cenarchaeum symbiosum
Length = 245
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/92 (21%), Positives = 39/92 (42%)
Frame = +3
Query: 99 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 278
Q+ MY+ +A Y P+ V+ ++ G+D GKG ++ DP G
Sbjct: 96 QSNRMMYDESVEVEAVAKHLADQCQQFTQYAGVRPFGVALIIGGVDDGGKGQLFLTDPSG 155
Query: 279 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQN 374
++ A G+ + Q+ L+ +M++
Sbjct: 156 TYISYDAIAIGAGSEQVTEFLEKSYKPGSMED 187
>UniRef50_Q8MSZ2 Cluster: GM14375p; n=3; Drosophila melanogaster|Rep:
GM14375p - Drosophila melanogaster (Fruit fly)
Length = 1162
Score = 34.7 bits (76), Expect = 3.3
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 204 YYVSNVLAGLDSDGKGCVYSYDPI--GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNV 377
+ V + AG+ GK + H R + +AGG ++ QL L GLK
Sbjct: 722 FNVLEINAGMKRTGKKLIQELQEATQSHQIRKDGKAGGGSSQQLLQKLQKS-GLKAKAAA 780
Query: 378 TEAPLPREKALALLKDVFISAAERDIYTGDSIYIL 482
E P K+L L++D I D D+IY L
Sbjct: 781 VEPPSEVRKSLILIEDADILFDNLDAGFTDAIYTL 815
>UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 195
Score = 34.7 bits (76), Expect = 3.3
Identities = 24/118 (20%), Positives = 52/118 (44%)
Frame = +3
Query: 153 AVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 332
++A++ S + + R +P+ ++ G D+ G +Y+ D G ++ GS
Sbjct: 75 SLARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNIDMFGSVEEKSYVTTGSG----- 128
Query: 333 PLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQ 506
+ + ++ A L ++A + +A R+I TGD I + +I +G +
Sbjct: 129 ----SPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGFE 182
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 34.3 bits (75), Expect = 4.4
Identities = 29/137 (21%), Positives = 58/137 (42%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
RLL + ++YE + + ++ A +++L+ M+Y + + ++ G D G G +Y D
Sbjct: 61 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPG-LYYVD 119
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
G+ + GS + ++D L E+A L + A R
Sbjct: 120 SEGNRISGATFSVGSGSVYAYGVMDRGYSY---------DLEVEQAYDLARRAIYQATYR 170
Query: 450 DIYTGDSIYILIITASG 500
D Y+G ++ + + G
Sbjct: 171 DAYSGGAVNLYHVREDG 187
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 34.3 bits (75), Expect = 4.4
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R L + +++E + + ++ +++L+ MLY R V ++AG D G G Y +
Sbjct: 114 RNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDN 173
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEA 386
G F GS + +LD+ G K +V EA
Sbjct: 174 EGGRLKGDRFSV-GSGSPYAYGVLDS--GYKYDMSVEEA 209
>UniRef50_A7CVC4 Cluster: Beta-galactosidase; n=1; Opitutaceae
bacterium TAV2|Rep: Beta-galactosidase - Opitutaceae
bacterium TAV2
Length = 1130
Score = 33.9 bits (74), Expect = 5.8
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 28 REFLKIXXATGLLV*HINLVRV-FYKRGCRCTNTSITNL*PLRQSHRCSQLCCITNDFSH 204
R L AT ++ ++N V V K C T IT+L Q + + + +D S+
Sbjct: 138 RVVLHFGGATSVITVYVNGVFVGLSKDSCLPTEFDITHLARFGQDNEITAIVIKWSDASY 197
Query: 205 TTYPTCWRVWTATV-RDVYIVTTLSDTVRAITSALVVPLLHSCNRSSTIKLA*RI 366
W W A + R+V++ +T + + + + P+LHS NR+++++L R+
Sbjct: 198 IEDQDQW--WLAGLHREVFLYSTPATHLGDVH---ITPVLHSDNRTASLRLDARV 247
>UniRef50_Q7QXH1 Cluster: Proteasome subunit alpha type; n=2;
Giardia intestinalis|Rep: Proteasome subunit alpha type
- Giardia lamblia ATCC 50803
Length = 214
Score = 33.9 bits (74), Expect = 5.8
Identities = 30/110 (27%), Positives = 48/110 (43%)
Frame = +3
Query: 99 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 278
QA Y+ + + AVA +L + + P+ VS +LAG D +G V+ DP G
Sbjct: 94 QAYRMTYDVAPSVEIIAKAVASILQSHTHRGGTRPFGVSIILAGNDLNGSH-VFMCDPSG 152
Query: 279 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDV 428
A G+ + L+ ++ QN +A + AL+ L DV
Sbjct: 153 VYTEWKALAIGNQCVTIIEFLEKKLKEGEPQNTNDALSLAKAALSELIDV 202
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 33.9 bits (74), Expect = 5.8
Identities = 30/138 (21%), Positives = 65/138 (47%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
R+L ++YE + + ++ ++M++ + ++ R + ++AG D DG +Y D
Sbjct: 136 RVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPH-LYYVD 194
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
G + + GS + +LD+ G + ++T+ E+A+ L K + A R
Sbjct: 195 NEGSRVKDCKFSVGSGSLYAYGVLDS--GYR--YDLTD-----EEAIDLGKRAIVIATNR 245
Query: 450 DIYTGDSIYILIITASGI 503
D +G + + I +G+
Sbjct: 246 DGGSGGLVRVYQINKNGV 263
>UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 204
Score = 33.9 bits (74), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 254
++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC
Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89
>UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 283
Score = 33.9 bits (74), Expect = 5.8
Identities = 33/168 (19%), Positives = 62/168 (36%)
Frame = +3
Query: 117 YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHN 296
Y+ + + A + M Y R+ ++AG D G VYS G C + +
Sbjct: 120 YQTDIGADVNVATAANLFHKMCYVNRW-NISAGIIVAGYDPINGGSVYSIPSGGSCVKLD 178
Query: 297 FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIY 476
+ GGS + L D + + + + +A + A RD +G I
Sbjct: 179 YALGGSGSIFLYSFFDANY---------KPGMSKSECVAFCQRAVAHAYSRDGSSGGLIR 229
Query: 477 ILIITASGIQEEKFELRKD*FVTKKSNKYFIQENNFVTYISE*KLIXN 620
+ + A ++ ++ + +K KY +Q + S K+ N
Sbjct: 230 TITLDADEAEDLTVPWKRSPYCMEKDPKYQVQAVQNPPFSSSAKVTGN 277
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 33.9 bits (74), Expect = 5.8
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLY--YKRFFPYYVSNVLAGLDSDGKGCVYSYD 269
+Q +Q+Y+ + ++ A A L + PY+V+ +LAG D +Y D
Sbjct: 60 IQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMD 119
Query: 270 PIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAER 449
+ A+ F A G A +LD + RE+A+ LL+ +R
Sbjct: 120 YLAALAKAPFAAHGYGAFLTLSILDRYY---------TPTISRERAVELLRKCLEELQKR 170
Query: 450 DIYTGDSIYILIITASGIQE 509
I + + II +GI +
Sbjct: 171 FILNLPTFSVRIIDKNGIHD 190
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 33.5 bits (73), Expect = 7.7
Identities = 30/131 (22%), Positives = 57/131 (43%)
Frame = +3
Query: 108 MQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCA 287
+++YE +N+ ++ A + +LS +LY + + +L+G D G Y D G
Sbjct: 122 IKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFY-IDDEGKKV 180
Query: 288 RHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGD 467
N + GS + +LD + + L E+A+ L ++ A RD +G
Sbjct: 181 EGNLFSCGSGSTYAYSILD---------SAYDYNLSVEQAVELGRNAIYHATFRDGGSGG 231
Query: 468 SIYILIITASG 500
+ + I +G
Sbjct: 232 KVRVFYIHKNG 242
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 33.5 bits (73), Expect = 7.7
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYS 263
T L++ +++ + + N+ MLS LY Y+ + ++ ++AG DS G V+
Sbjct: 97 TSLIEGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQGYIGAHL--IVAGSDSTGN-FVFQ 153
Query: 264 YDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAA 443
G + F + GS + + +L+ + +TE+ + + L+ D +
Sbjct: 154 VSANGCIMQLPFTSMGSGSLCARSILE----ARYRDGLTES-----ECVELVSDAIRAGI 204
Query: 444 ERDIYTGDSIYILII 488
D+Y+G ++ ILII
Sbjct: 205 YNDLYSGSNVNILII 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,980,753
Number of Sequences: 1657284
Number of extensions: 12254358
Number of successful extensions: 30932
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 29765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30890
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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