Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_M14
(916 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 158 5e-39
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 140 1e-33
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 53 4e-07
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 45 1e-04
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 38 0.015
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 37 0.019
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 37 0.026
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 31 1.3
02_04_0055 - 19290975-19292312 31 1.3
10_08_1038 - 22485394-22485960,22486712-22487197 30 2.2
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 29 6.8
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 158 bits (384), Expect = 5e-39
Identities = 76/150 (50%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
Frame = +3
Query: 96 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 275
L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++YD +
Sbjct: 72 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 131
Query: 276 GHCARHNFRAGGSAAAQLQPLLDNQIGLKN--MQNVTEA--PLPREKALALLKDVFISAA 443
G R + A G+ +A + P+LDNQ+ + + +A PL +A+ L+KDVF SA
Sbjct: 132 GSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASAT 191
Query: 444 ERDIYTGDSIYILIITASGIQEEKFELRKD 533
ERDIYTGD + I++I +G + E +LRKD
Sbjct: 192 ERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 140 bits (339), Expect = 1e-33
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 25/173 (14%)
Frame = +3
Query: 90 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD--------- 242
R L A+ +YEH HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+
Sbjct: 68 RNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEVAAHQYERM 127
Query: 243 ------------GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKN--MQNVT 380
GKGCV++YD +G R + A G+ AA + P+LDNQ+ + +
Sbjct: 128 ITTCENIFSSFAGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPAR 187
Query: 381 EA--PLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 533
+A PL + A+ L+KDVF SA ERDIYTGD + I++I ++G E ELRKD
Sbjct: 188 DAVTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 240
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 52.8 bits (121), Expect = 4e-07
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 281
R ++Y+ + M A A ++S +LY KRF PY+ V+AGL + + + + D IG
Sbjct: 79 RHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAK 138
Query: 282 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYT 461
+F G+A+ L ++M + P E+ + ++ +RD +
Sbjct: 139 ELAKDFVVSGTASESLYG------ACESMYKPSMEP---EELFETISQALQASVDRDCLS 189
Query: 462 GDSIYILIITASGIQEEKFELRKD 533
G Y+L++T + +QE + R D
Sbjct: 190 GWGGYVLLVTPTEVQERVIKGRMD 213
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 44.8 bits (101), Expect = 1e-04
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Frame = +3
Query: 105 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG-H 281
R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D IG
Sbjct: 183 RHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIGAK 242
Query: 282 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERDIYT 461
+F G+A+ L ++ NM+ E+ + S+ +RD +
Sbjct: 243 ELAKDFVVSGTASESLYGACESMY-KPNME--------PEELFETISQALQSSVDRDCLS 293
Query: 462 GDSIYILII 488
G ++L++
Sbjct: 294 GWGGFVLLV 302
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 37.5 bits (83), Expect = 0.015
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPA---VAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCV 257
T+++ ++ + H+H + PA VA L +L Y+ ++ G D G +
Sbjct: 77 TQVISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 258 YSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKD 425
+S G R F GGS ++ L LLD++ Q E + + +LA+ +D
Sbjct: 137 FSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARD 192
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 37.1 bits (82), Expect = 0.019
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPA---VAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCV 257
T+++ ++ + H+H + PA VA L +L Y+ ++ G D G +
Sbjct: 77 TQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 258 YSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKD 425
+S G R F GGS ++ L LLD++ Q E + + +LA+ +D
Sbjct: 137 FSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARD 192
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 87 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDSDGKGCVYS 263
T +Q + +Y+ +N ++T A A L R PYYV+ +LAG DSD +Y
Sbjct: 57 TEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYY 116
Query: 264 YDPI 275
D I
Sbjct: 117 IDYI 120
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 303 AGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPRE 401
AGG++AA L P+L + +GL N PLP+E
Sbjct: 110 AGGASAAALSPILASSLGL-NRIKTRSGPLPQE 141
>02_04_0055 - 19290975-19292312
Length = 445
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 210 VSNVLAGL-DSDGKGCVYSYDPIGHCARHNFRAGGSAAA 323
VS AG+ D DG D I +C+ H +R G +AAA
Sbjct: 5 VSEAAAGVEDQDGGVAAAGMDGIQYCSEHPYRPGAAAAA 43
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 337 SGCSCAAAEPPARKLWRAQCPIGS*LYTHPLPSLS-KPANT 218
S SCAAA PP+ + R PIG L P L+ PANT
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIG--LARSPAHLLAPTPANT 134
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 296 LPRWWFRCCTAATAPRQSNWL 358
LPRWW CC T R ++++
Sbjct: 397 LPRWWCCCCFTVTGSRFTDYI 417
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,737,586
Number of Sequences: 37544
Number of extensions: 370648
Number of successful extensions: 848
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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