Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_M09
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.52
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.52
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.69
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 32 0.69
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.91
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.91
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.91
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 29 6.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 29 6.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 6.4
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 6.4
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 29 6.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 6.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 6.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 8.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.5
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 28 8.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 8.5
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 706 PXGPXRXPXGP-PXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
P GP GP P PPG P GG R R PP P
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGP 179
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +1
Query: 688 GXXGSQPXGPXRXPXGPPXPP----PGXPXXRPXXGGDXRXXXRPPPNP 822
G G G R P GP PP P RP G R PP P
Sbjct: 163 GELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 706 PXGPXRXPXGP-PXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
P GP GP P PPG P GG R R PP P
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGGPGRGGNRGPPGP 179
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +1
Query: 688 GXXGSQPXGPXRXPXGPPXPP----PGXPXXRPXXGGDXRXXXRPPPNP 822
G G G R P GP PP P RP G R PP P
Sbjct: 163 GELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = +1
Query: 649 GXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXP 828
G P P G G G + PP PPP P P + + +P P P P
Sbjct: 69 GPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEP 128
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 688 GXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXP 828
G +P G P PP P P RP + + +P P P P
Sbjct: 86 GGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEP 132
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 706 PXGPXRXPXGPPXPPPGXPXXRPXXGG---DXRXXXRPPPNPXPXXVGTLP 849
P GP P PP G P P GG PPP P P +G P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAP 127
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.52
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
S G +P P + PP PP G P G R RPP P P GT P
Sbjct: 149 SGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASR---RPP--PPPKGTGTPP 200
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
S G +P P + PP PP G P G+ RPP P P GT P
Sbjct: 242 SGEGNASRRPPPPPKGTGSPPPPPTGEP---QDLSGEGNASRRPP--PPPKGTGTPP 293
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
S G +P P + PP PP G P G+ RPPP P
Sbjct: 118 SGEGNASRRPPPPPKGTGSPPPPPTGEP---QDLSGEGNASRRPPPPP 162
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 688 GXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
G +P P + PP PP G P G+ RPPP P
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEP---QDLSGEGNASRRPPPPP 131
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
S G +P P + PP PP G P G R RPPP P
Sbjct: 180 STEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASR---RPPPPP 224
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 703 QPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
+P P + PP PP G P G+ RPP P P GT P
Sbjct: 32 RPPPPPKGTGTPPPPPTGEP---QDLSGEGNASRRPP--PPPKGTGTPP 75
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
S G +P P + PP PP G P G+ RPP P P GT P
Sbjct: 55 SGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGN--ASRRPP--PPPKGTGTPP 107
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
S G +P P + P PP G P G+ RPPP P
Sbjct: 211 SAEGYASRRPPPPPKGTGSPTPPPTGEP---QDLSGEGNASRRPPPPP 255
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPX--GPPXPPPGXPXXRPXXGGDXRXXXRP--PPNPXP 828
SP+G P P P GPP P P P P + +P PP+P P
Sbjct: 100 SPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGP 153
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/57 (36%), Positives = 22/57 (38%)
Frame = +1
Query: 658 PRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXP 828
P+ SP S P P GPP PPG P RP G RPP P P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPS-DPPGPPG-PPGPPTRRP-PGPPGPPTRRPPGPPGP 274
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRP 774
P G +P GP P P PPG P RP
Sbjct: 249 PPGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +1
Query: 679 SPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPP 813
SP+ G P GP P P PPG P RP G RPP
Sbjct: 239 SPSDPPG--PPGPPGPPTRRPPGPPGPPTRRP-PGPPGPPTRRPP 280
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.69
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGG 786
PAG G+ P G P GPP PP P P G
Sbjct: 194 PAGADGNTPSGGGEGPAGPPGPP--GPAGNPGTDG 226
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXP 747
P + G G PG G P +G P G P P R P P
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP-PPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 748 PPGXPXXRPXXGGDXRXXXRPPPNP 822
P P RP PPP P
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/97 (26%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = +1
Query: 598 PGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPP--GXPXXR 771
PG +G P G P + +G G P P P P PPP P
Sbjct: 227 PGVHAAIAAHATGRP--GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMT 284
Query: 772 PXXGGDXRXXXRPPPNPXPXXVGTLPSVXAXXFXPXP 882
P PPP P P G P P P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPP--GRTPGPPGMPGMPPP 319
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPN 819
P G PR S P P R P GPP P P P G PPP
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 820 P 822
P
Sbjct: 338 P 338
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +1
Query: 697 GSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLPSVXAXXFXP 876
G+ P P PP PPP P PPP P P +G LP+V A P
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSA------APPPPPPPPPMG-LPAVGAGAPPP 651
Query: 877 XP 882
P
Sbjct: 652 PP 653
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 736 PPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLPSVXA 861
PP PPP P P G PPP P P G SV A
Sbjct: 630 PPPPPPPPPMGLPAVGA---GAPPPPPPPPPSGAGGPASVLA 668
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +1
Query: 697 GSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLPSVXAXXFXP 876
G+ P P PP PPP P PPP P P +G LP+V A P
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSA------APPPPPPPPPMG-LPAVGAGAPPP 477
Query: 877 XP 882
P
Sbjct: 478 PP 479
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 736 PPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLPSVXA 861
PP PPP P P G PPP P P G SV A
Sbjct: 456 PPPPPPPPPMGLPAVGA---GAPPPPPPPPPSGAGGPASVLA 494
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.91
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXP 747
P + G G PG G P +G P G P P R P P
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP-PPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 748 PPGXPXXRPXXGGDXRXXXRPPPNP 822
P P RP PPP P
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/97 (26%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = +1
Query: 598 PGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPP--GXPXXR 771
PG +G P G P + +G G P P P P PPP P
Sbjct: 237 PGVHAAIAAHATGRP--GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMT 294
Query: 772 PXXGGDXRXXXRPPPNPXPXXVGTLPSVXAXXFXPXP 882
P PPP P P G P P P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPP--GRTPGPPGMPGMPPP 329
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPN 819
P G PR S P P R P GPP P P P G PPP
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTP-GPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 820 P 822
P
Sbjct: 348 P 348
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 706 PXGPXRXPXGP-PXPPPGXPXXRPXXGGDXRXXXRPPPNP 822
P GP GP P PPG P G R R PP P
Sbjct: 145 PVGPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGP 184
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +2
Query: 680 AXPXXXXASRXGRXGXLXXPPXPPXXXXXXXPXXGXTXGXXXAXPPTP--XPPRXVXSPL 853
A P R R G PP PP P PP+P PPR SP
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 854 SGXXXXRPVPPI 889
P PI
Sbjct: 180 PRNPPRTPPSPI 191
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 736 PPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLPS 852
PP PPP P P R PP+P T PS
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 10/54 (18%)
Frame = +1
Query: 697 GSQPXGPXRXPX--GPPXPPP--------GXPXXRPXXGGDXRXXXRPPPNPXP 828
G P P P GPP PPP G P P GG PPP P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGX--PXXRPXXGGDXRXXXRPP 813
P G P P G P P PP PPPG P P G + PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 814 PNP 822
P P
Sbjct: 788 PPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 10/54 (18%)
Frame = +1
Query: 697 GSQPXGPXRXPX--GPPXPPP--------GXPXXRPXXGGDXRXXXRPPPNPXP 828
G P P P GPP PPP G P P GG PPP P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGX--PXXRPXXGGDXRXXXRPP 813
P G P P G P P PP PPPG P P G + PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 814 PNP 822
P P
Sbjct: 788 PPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 10/54 (18%)
Frame = +1
Query: 697 GSQPXGPXRXPX--GPPXPPP--------GXPXXRPXXGGDXRXXXRPPPNPXP 828
G P P P GPP PPP G P P GG PPP P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGX--PXXRPXXGGDXRXXXRPP 813
P G P P G P P PP PPPG P P G + PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 814 PNP 822
P P
Sbjct: 371 PPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPN 819
P G P P P P PP PP G P P G PP
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 820 PXP----XXVGTLPSVXAXXFXP 876
P P G+LP A P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPP 322
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 648 RXXPPXKXGXEPXRXXGXPAXXAG*DXXWXPLAPPXXXXXPXRXGGXXPDXXTPXPQPPP 827
R PP P G P AG P PP P G P T P PPP
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPL-AG---SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 828 XXGXYXPLCXGXP 866
G P G P
Sbjct: 285 AGGSPPPPRAGSP 297
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 657 PPXKXGXEPXRXXGX--PAXXAG*DXXWXPL--APPXXXXXPXRXGGXXPDXXTPXPQPP 824
PP G P G P AG P +PP P + GG P T P PP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Query: 825 P 827
P
Sbjct: 333 P 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPN 819
P G P P P P PP PP G P P G PP
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 820 PXP----XXVGTLPSVXAXXFXP 876
P P G+LP A P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPP 343
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 648 RXXPPXKXGXEPXRXXGXPAXXAG*DXXWXPLAPPXXXXXPXRXGGXXPDXXTPXPQPPP 827
R PP P G P AG P PP P G P T P PPP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPL-AG---SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 828 XXGXYXPLCXGXP 866
G P G P
Sbjct: 306 AGGSPPPPRAGSP 318
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 657 PPXKXGXEPXRXXGX--PAXXAG*DXXWXPL--APPXXXXXPXRXGGXXPDXXTPXPQPP 824
PP G P G P AG P +PP P + GG P T P PP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Query: 825 P 827
P
Sbjct: 354 P 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 640 PXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPN 819
P G P P P P PP PP G P P G PP
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 820 PXP----XXVGTLPSVXAXXFXP 876
P P G+LP A P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPP 328
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 648 RXXPPXKXGXEPXRXXGXPAXXAG*DXXWXPLAPPXXXXXPXRXGGXXPDXXTPXPQPPP 827
R PP P G P AG P PP P G P T P PPP
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPL-AG---SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 828 XXGXYXPLCXGXP 866
G P G P
Sbjct: 291 AGGSPPPPRAGSP 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 657 PPXKXGXEPXRXXGX--PAXXAG*DXXWXPL--APPXXXXXPXRXGGXXPDXXTPXPQPP 824
PP G P G P AG P +PP P + GG P T P PP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Query: 825 P 827
P
Sbjct: 339 P 339
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXP 747
P GT G+ G L P P P G G G P GPP P
Sbjct: 175 PQGDAGTSGQDGVPGLPGPPGPSGPQ--GAPGVPGEKGPTGEPGKVINGAPPGPPGPPGP 232
Query: 748 P-PGXPXXRPXXGGDXRXXXRPPP 816
P P P P G D + PP
Sbjct: 233 PGPQGPPGPP--GKDGQPGKAGPP 254
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXR---XXXRPPPNPXPXXVGTLP 849
P P GP P P PP G P GG RPPP G P
Sbjct: 752 PMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 658 PRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPG--XPXXRPXXGGDXRXXXRPPPNPXP 828
P +PA G Q P R G P PPPG P P GG P P P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAP-PPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXR---XXXRPPPNPXPXXVGTLP 849
P P GP P P PP G P GG RPPP G P
Sbjct: 752 PMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 658 PRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXP 828
P +PA G Q P R G P PP P GG P P P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXR---XXXRPPPNPXPXXVGTLP 849
P P GP P P PP G P GG RPPP G P
Sbjct: 752 PMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 658 PRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNPXP 828
P +PA G Q P R G P PP P GG P P P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGP 819
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXR---XXXRPPPNPXPXXVGTLP 849
P P GP P P PP G P GG RPPP G P
Sbjct: 752 PMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYP 810
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 658 PRXXXXXSPAGXXGSQPXGPXRXPXGPPXPPPG--XPXXRPXXGGDXRXXXRPPPNPXP 828
P +PA G Q P R G P PPPG P P GG P P P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAP-PPPGMRPPPGAPGGGGGMYPPLIPTRVPTP 820
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/95 (26%), Positives = 27/95 (28%)
Frame = +1
Query: 505 PXXRGXPXXXIXXSPXLXAXXPXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSP 684
P G P +P A K G P G +G P P P
Sbjct: 42 PPAGGQPTPGDAGNPNSQAGDSGKPNPPAGDPTKLKPGGGGPAGKPG----PNAGDTTKP 97
Query: 685 AGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGD 789
G P P G P PP G P GGD
Sbjct: 98 NSQSGD-PKPRGGDPAGKPNPPAGDPSKTKPQGGD 131
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 688 GXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGG 786
G G+ P G P GPP PPG P GG
Sbjct: 190 GAPGNTPSGGAAGPPGPPG-PPGGPGNDGQPGG 221
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRPPPNP-XPXXVGTLPSVX 858
P G G P P P G PPG P G D + P NP P V +P
Sbjct: 182 PPGAPGG-PGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGG--PGNPGAPGAVTEVPGQQ 238
Query: 859 AXXFXPXP 882
P P
Sbjct: 239 GPPGPPGP 246
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Frame = +1
Query: 583 GTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXPXGPPXPP-PGX 759
G G PG G P P P G G G P GPP PP P
Sbjct: 185 GAPGNPGRPGQSGQRSRGLPGPSGRP---GPQGPPGAPGQPGSGSTPGPAGPPGPPGPNG 241
Query: 760 PXXRPXXGG 786
P G
Sbjct: 242 QPGHPGQDG 250
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 29/104 (27%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXP--XGPP 741
P G G PG P P P G P GP P GPP
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPG-----PPGPPGAPGNDGPP 239
Query: 742 XP--PPGXPXXRPXXGGDXRXXXRPPPNP--XPXXVGTLPSVXA 861
P P G P G D + PP P P G P A
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKYCA 283
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +1
Query: 658 PRXXXXXSPAGXXG-SQPXGPXRXPXGPPXP--PPGXPXXRPXXGGDXRXXXRPPPNP 822
P P G G S GP P GPP P PP P P RP +P
Sbjct: 62 PAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSP 119
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 29/104 (27%), Positives = 30/104 (28%), Gaps = 6/104 (5%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXP--XGPP 741
P G G PG P P P G P GP P GPP
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPG-----PPGPPGAPGNDGPP 239
Query: 742 XP--PPGXPXXRPXXGGDXRXXXRPPPNP--XPXXVGTLPSVXA 861
P P G P G D + PP P P G P A
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKYCA 283
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 49 AMPPPPVPPRPLRLPQTAAKGPAPLPP 75
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 806 AXPPTPXPPRXVXSPLSGXXXXRPVPP 886
A PP P PPR + P + P+PP
Sbjct: 172 AMPPPPVPPRPLRLPQTAAKGPAPLPP 198
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +1
Query: 583 GTVGRPGXXXLXXGXXS-GFPX-LGXXPRXXXXXSPA--GXXGSQPXGPXRXPXGPPXP- 747
G G+PG G + G P G +P G G G P GPP P
Sbjct: 203 GNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRP-GPPGPA 261
Query: 748 -PPGXPXXRPXXGGDXRXXXRPPPNP 822
PPG P GG PP P
Sbjct: 262 GPPGPPGNNGAPGGGYGVGPPGPPGP 287
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXP--XGPP 741
P G G+PG P P PAG P GP P GPP
Sbjct: 192 PPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAG-----PPGPPGAPGNDGPP 246
Query: 742 XPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGT 843
PP P P G + P P GT
Sbjct: 247 GPP--GPKGSPGPDGPAGVDGQAGPPGPPGQAGT 278
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = +1
Query: 688 GXXGSQPXGP----XRXPXGPPXP--PPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
G G P GP P GPP P PP P RP +P + TL
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISPAVKNGHDDPENDTIVTLS 681
Query: 850 SVXAXXFXPXP 882
V P P
Sbjct: 682 EVFGSMSNPKP 692
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = +1
Query: 688 GXXGSQPXGP----XRXPXGPPXP--PPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
G G P GP P GPP P PP P RP +P + TL
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSISPAVKNGHDDPENDTIVTLS 681
Query: 850 SVXAXXFXPXP 882
V P P
Sbjct: 682 EVFGSMSNPKP 692
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 682 PAGXXGSQPXGPXRXPXGPPXPPPGXPXXRPXXGGDXRXXXRP-PPNPXPXXVGTLP 849
P+ Q GP P PP PPG P G P PPNP G P
Sbjct: 394 PSYPSPGQYPGPMHYPGMPPMMPPGAPF---SAGASYPPMGGPFPPNPYGMHPGMTP 447
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +1
Query: 706 PXGPXRXPXGPPXPPPGXPXXR---PXXGGDXRXXXRPPPNPXPXXVGTLP 849
P G G P PP G + P GG PPP P P G P
Sbjct: 1562 PHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 736 PPXPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGTLP 849
PP PPP P R + PP P P V ++P
Sbjct: 508 PPTPPPPAPGPHKE---QRRSTSKDPPRPAPPPVSSIP 542
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +1
Query: 568 PXKXXGTVGRPGXXXLXXGXXSGFPXLGXXPRXXXXXSPAGXXGSQPXGPXRXP--XGPP 741
P G G+PG P P PAG P GP P GPP
Sbjct: 192 PPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAG-----PPGPPGAPGNDGPP 246
Query: 742 XPPPGXPXXRPXXGGDXRXXXRPPPNPXPXXVGT 843
PP P P G + P P GT
Sbjct: 247 GPP--GPKGSPGPDGPAGVDGQAGPPGPPGQAGT 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,268,708
Number of Sequences: 27780
Number of extensions: 186901
Number of successful extensions: 1282
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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