Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M07
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   7.3  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    24   7.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.6  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 166 LSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVN 309
           + + DLH   D  +   S C         + RV    KQ+K   KT N
Sbjct: 39  IHINDLHARFDETNQKSSTCTNSKECIAGIARVYHTIKQLKSEYKTKN 86


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 166 LSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVN 309
           + + DLH   D  +   S C         + RV    KQ+K   KT N
Sbjct: 39  IHINDLHARFDETNQKSSTCTNSKECIAGIARVYHTIKQLKSEYKTKN 86


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 482 KRVLEAHGFKCKEGPDLGPEYYGEYIQYLEDDEEIGAVV 598
           ++VLE+   + +E  D+   YYG  I+    D+ I   V
Sbjct: 513 RKVLESFLQRGREYADIANAYYGPVIENFNCDKSIYTAV 551


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,759
Number of Sequences: 2352
Number of extensions: 13702
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)