Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M07
         (902 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   1.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.7  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   8.8  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 454 CLLCNLY*DQKSLRSSRIQMQGR 522
           CLLC    DQK+L  S ++  G+
Sbjct: 64  CLLCQKAFDQKNLYQSHLRSHGK 86


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 782 STAXVHFTVTRSVKLPSLNPKDPVSWAPS 696
           STA +H  V  +   PS NP+  ++ APS
Sbjct: 496 STAVIHEPVVETNSSPSPNPR--IASAPS 522


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 285 EETREDSKFRFQLTAFDPEQIMKL 356
           + T  + KFR + T  D EQ+ +L
Sbjct: 76  DTTFNEEKFRERTTKLDSEQVNRL 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,461
Number of Sequences: 438
Number of extensions: 3614
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)