Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M05
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0569 + 30313337-30313650,30314271-30314353,30314763-303148...    30   2.3  
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622...    30   3.0  
02_05_0388 + 28541751-28541820,28541912-28542054,28542199-285422...    30   3.0  
07_01_0930 + 7822669-7823265,7823368-7823466,7823563-7823783,782...    29   3.9  
05_06_0055 + 25235844-25235872,25237026-25237932                       29   5.2  

>01_06_0569 +
           30313337-30313650,30314271-30314353,30314763-30314876,
           30315876-30315938,30316289-30316380,30316464-30316544,
           30316629-30316727,30316795-30316933,30317017-30317165
          Length = 377

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 295 FNGIVSVDIYDVV*ELMKIRKGTECTIGTMATSSFLVS 408
           FNG + +D YD +   MK+R    C I T+ T +++ S
Sbjct: 223 FNGFIDLDAYDTI--AMKLRGDGRCYISTIYTENWVNS 258


>03_05_1065 +
           30061588-30061883,30061995-30062056,30062196-30062276,
           30062391-30062464,30062547-30062629,30063044-30063147,
           30063526-30063665,30063736-30063783,30063939-30063991,
           30064178-30064262,30064346-30064412,30064496-30064606,
           30065262-30065283,30066244-30071110,30071186-30071374,
           30071463-30071577,30072329-30073388,30074247-30074694,
           30074966-30075019,30075105-30076898,30076989-30077949,
           30078271-30078384,30078459-30078613,30078934-30079026,
           30079341-30079613,30093423-30093975,30094465-30094540,
           30094619-30094718
          Length = 4025

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 739 YFMQGGEMFSTFKIGAQSINGFAQXRCLIICFTSNENK 852
           Y +QGG+  + F+  A ++NGFA    L +  TS+ ++
Sbjct: 349 YDLQGGQWVTAFQAAADTVNGFAFHPYLPLATTSSGHR 386


>02_05_0388 +
           28541751-28541820,28541912-28542054,28542199-28542248,
           28543087-28543210,28543765-28543770
          Length = 130

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
 Frame = +3

Query: 357 GYRVYHWYNGHVQLLGLLAAEVCSTLRAHLHHHCWMAAFFQIC---YSRTV---NAKYYV 518
           G RV ++  GH + +  L+A  CS L    H   W  A    C   +S+T+    A YYV
Sbjct: 46  GTRVVYFPQGHSEQVSWLSAMGCSLLSRGNHQRPWWIALPSSCWCFFSKTLAEREAFYYV 105

Query: 519 *NN 527
            +N
Sbjct: 106 VDN 108


>07_01_0930 +
           7822669-7823265,7823368-7823466,7823563-7823783,
           7824319-7824388,7824493-7824572,7825373-7825437,
           7826476-7826669
          Length = 441

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -2

Query: 441 VRGVWSRPPQRGDQEAGRGHCTNGTLCTLSDLHELSDYIININTHYP 301
           VRG+ +  P R   + G G  T+G+   + D  E++D++  +    P
Sbjct: 50  VRGIRAELPPRACADGGGGATTSGSTVAVPDAGEVADHVKEVGAVAP 96


>05_06_0055 + 25235844-25235872,25237026-25237932
          Length = 311

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 399 LGLL-AAEVCSTLRAHLHHHCWMAAFF 476
           LGLL AA + +TL AH HHH   AA++
Sbjct: 193 LGLLNAATMPATLAAHHHHHHHAAAYY 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,069,361
Number of Sequences: 37544
Number of extensions: 442256
Number of successful extensions: 1023
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)