Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M05
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF039051-13|AAB94269.1|  300|Caenorhabditis elegans Hypothetical...    28   8.2  

>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = -3

Query: 488 VADLEECRHPTVMMEMCAECGADLRSE-----ETKKLDVAIVPMVHSVPFLI 348
           +A + EC H  V+ +MCA CG DLR +     + K+   A V M+H VP LI
Sbjct: 70  IATVSECTHAIVIKDMCATCGKDLREKGGRAGQRKEQSTANVSMIHHVPELI 121


>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
           protein C44B9.4 protein.
          Length = 1150

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 482 DLEECRHPTVMMEMCAECGADLRSEETKKL 393
           D  E + PT+M E+CAEC  +L+ + T+ L
Sbjct: 207 DAMEDKRPTIMGEVCAEC--NLKDDWTRML 234


>AF039051-13|AAB94269.1|  300|Caenorhabditis elegans Hypothetical
           protein C14C6.13 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 41  RFXVSNRLRNYWTDLKNYF 97
           R+  SN + NY+ D KNYF
Sbjct: 93  RYDTSNNIYNYYQDYKNYF 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,166,606
Number of Sequences: 27780
Number of extensions: 390306
Number of successful extensions: 794
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)