Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M04
         (1132 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.19 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.19
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 1026 GGGGXXXPTPGGGGGG 979
            GGG    P PGGGGGG
Sbjct: 215  GGGSSGGPGPGGGGGG 230



 Score = 26.6 bits (56), Expect = 1.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 1026 GGGGXXXPTPGGGGG 982
            GGGG     PGGGGG
Sbjct: 203  GGGGSGGGAPGGGGG 217


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 980  PPPPPPGVGXXXPPP 1024
            PPPPPPG      PP
Sbjct: 531  PPPPPPGGAVLNIPP 545



 Score = 23.8 bits (49), Expect = 9.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 980  PPPPPPGVGXXXPPPP 1027
            PPPPPP  G     PP
Sbjct: 530  PPPPPPPGGAVLNIPP 545


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 4.1
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
 Frame = -3

Query: 482 GGGGGXFXKK--KXRXXPPFXXXXXGGVFSPPP 390
           GGGGG +  +    R  PP      GG +  PP
Sbjct: 125 GGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPP 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,719
Number of Sequences: 2352
Number of extensions: 8026
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 126711570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)