Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M03
         (904 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.46 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.61 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   10.0 

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +3

Query: 555 WE-HWAHNAAEQAEEFVRKVW 614
           W+ HW +  AEQA+  ++ VW
Sbjct: 362 WQSHWLNKGAEQAKNVLKCVW 382


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 505 GIQQMLILRC*RQRTSFFFFCEDFVELVHL 416
           GI   L+ +C   R  ++F+C      VHL
Sbjct: 41  GILDSLVFKCYNLRRIYYFYCVSITFNVHL 70


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 470 PSTPEDQHLLDA 505
           P +PED+ LLDA
Sbjct: 234 PKSPEDEELLDA 245


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 342 DPKACPPMDCDAGKDGIPMRRALP 413
           DP  C   DC   +DG  +   LP
Sbjct: 164 DPAVCVLPDCFCSEDGTTIPGDLP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,262
Number of Sequences: 336
Number of extensions: 4807
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)