Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M03
         (904 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    27   0.59 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   3.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.6  
AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding pr...    23   9.6  
AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative odorant-b...    23   9.6  

>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 540 PMRLIWEHWAHNAAEQAEEFVRKVW 614
           P R  W+ W H  +E  +  + KVW
Sbjct: 2   PFRRFWQEWDHIKSEMVDCKIPKVW 26


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 580 PNRPKNSFAKYGRRRGTCAISDI 648
           P+ P+ S A+YG RRG   IS I
Sbjct: 537 PDSPQLSDAQYGFRRGRSTISAI 559


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 539 ITRQLSKLQPFRHPTDVDPPVLKA 468
           I + L +LQP R   D DP VLK+
Sbjct: 363 IRKVLYRLQPSRTAQDRDPVVLKS 386


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 580 PNRPKNSFAKYGRRRGTCAISDICHV 657
           P+ P+ S A+YG RRG    S I  V
Sbjct: 532 PDSPRLSDAQYGFRRGRSTFSAIQRV 557


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 653  WQMSEMAHVPRRLPYFANEFFGLFGGVMGPVLPNQSHRITRQLSKLQPF 507
            WQ+    H  R   Y  +E +G     +  VLP Q H + +  S+ +PF
Sbjct: 1865 WQVGNYEH--RLTTYTYSETYGH----LIEVLPPQFHALAKTTSRTRPF 1907


>AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding
           protein AgamOBP48 protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = -2

Query: 690 VLCVNNRCLAANVANV*NGTRSTTPPILCERILRPVRRRYGPSAPKSISSDNTP 529
           VL  +N C A    +        TP ++   I+    ++YG    K +  D  P
Sbjct: 26  VLAGDNPCAAGPPVDTNPAECCPTPMLVDGTIMMDCYKKYGEQTKKQLQMDGIP 79


>AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative
           odorant-binding protein OBP3788 protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = -2

Query: 690 VLCVNNRCLAANVANV*NGTRSTTPPILCERILRPVRRRYGPSAPKSISSDNTP 529
           VL  +N C A    +        TP ++   I+    ++YG    K +  D  P
Sbjct: 26  VLAGDNPCAAGPPVDTNPAECCPTPMLVDGTIMMDCYKKYGEQTKKQLQMDGIP 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,520
Number of Sequences: 2352
Number of extensions: 20061
Number of successful extensions: 71
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)