Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_M03
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...    97   1e-20
AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...    97   2e-20
AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical ...    34   0.16 
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.85 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.85 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.85 
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   6.0  
U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
 Frame = +3

Query: 600 VRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPXLPSFSACFASIFRIHTETGNIWTXSP 779
           V K +EA W V  + HLP WLQDN++L  GHRP LPSFS CF SI+ +HTETGNIWT   
Sbjct: 150 VTKTYEARWKVLKYEHLPEWLQDNEFLRHGHRPPLPSFSECFKSIWSLHTETGNIWTHLI 209

Query: 780 WLRGIHWRRDLLFVSSIYRXQMQKK-FFWGFFGXAIRCLG 896
                 +             Q Q+K  F  FF  A+ CLG
Sbjct: 210 GCVAFFFLACWFLTRPDNHIQFQEKVVFSFFFAGAVLCLG 249


>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 600 VRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPXLPSFSACFASIFRIHTETGNIWT 770
           +++ WEA W   +F  LP WLQDN+YL  GHRP LPSFS+CF SIF +HTETGNIWT
Sbjct: 260 IKRFWEARWKATNFETLPEWLQDNEYLRTGHRPPLPSFSSCFKSIFALHTETGNIWT 316



 Score = 35.5 bits (78), Expect = 0.052
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +1

Query: 772 HLLGCVAFIGVAIYFLSRPS-----IEXKCRKSFFGGFLAALSDASVF 900
           H+ GCVAF G+ I+FL+RP      +E     +FF G +  L  + +F
Sbjct: 317 HMYGCVAFFGIGIWFLTRPHDQMQWVEKLIYSAFFLGAVICLGMSFLF 364


>AL117206-8|CAB60449.2|  328|Caenorhabditis elegans Hypothetical
           protein Y67A10A.8 protein.
          Length = 328

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 648 LPRWLQDNDYLHKGHRPXLPSFSACFASIFRIHTETGNIWT 770
           L + L  NDY+   +RP   +   C  S F I+ ET NIW+
Sbjct: 28  LHKTLWQNDYVINHYRPPAMTKKMCAKSAFHINNETINIWS 68


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 344 IQYQIPLPTSSLVSITRRWEIGNHWPP 264
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 344 IQYQIPLPTSSLVSITRRWEIGNHWPP 264
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 344 IQYQIPLPTSSLVSITRRWEIGNHWPP 264
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 347 GIQYQIPLPTSSLVSITRRWEIGNHWPP 264
           G+ YQ PLP+S+++   R+ E     PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265


>U00055-3|AAA50723.3|  693|Caenorhabditis elegans Hypothetical
           protein R02F2.7 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 798 NECHAAKEMXSKCYLSQCGFGKLMQNMR 715
           NE   A E  S   L   GFGKL+QNM+
Sbjct: 117 NEIRIANEFISTSNLLGHGFGKLLQNMK 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,969,742
Number of Sequences: 27780
Number of extensions: 449410
Number of successful extensions: 1190
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)